RNA–Protein interactions for RNA: ENST00000511563.5

UVSSA-208, Transcript of UV stimulated scaffold protein A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UVSSA, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UVSSA-208ENST00000511563 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
UVSSA-208ENST00000511563 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
UVSSA-208ENST00000511563 ABCC9O60706 1549 aa32.62■■■□□ 2.81
UVSSA-208ENST00000511563 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
UVSSA-208ENST00000511563 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
UVSSA-208ENST00000511563 NACADO15069 1562 aa31.46■■■□□ 2.63
UVSSA-208ENST00000511563 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
UVSSA-208ENST00000511563 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
UVSSA-208ENST00000511563 DCAF1Q9Y4B6 1507 aa31.21■■■□□ 2.59
UVSSA-208ENST00000511563 UNC13AQ9UPW8 1703 aa30.72■■■□□ 2.51
UVSSA-208ENST00000511563 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
UVSSA-208ENST00000511563 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
UVSSA-208ENST00000511563 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
UVSSA-208ENST00000511563 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
UVSSA-208ENST00000511563 DNAJC5BQ9UF47 199 aa29.73■■■□□ 2.35
UVSSA-208ENST00000511563 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
UVSSA-208ENST00000511563 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
UVSSA-208ENST00000511563 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
UVSSA-208ENST00000511563 BAZ1AQ9NRL2 1556 aaPredicted RBP29.24■■■□□ 2.27
UVSSA-208ENST00000511563 SMARCA4P51532 1647 aa29.24■■■□□ 2.27
UVSSA-208ENST00000511563 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
UVSSA-208ENST00000511563 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
UVSSA-208ENST00000511563 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
UVSSA-208ENST00000511563 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
UVSSA-208ENST00000511563 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
UVSSA-208ENST00000511563 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
UVSSA-208ENST00000511563 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
UVSSA-208ENST00000511563 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
UVSSA-208ENST00000511563 WIZO95785 1651 aa28.73■■■□□ 2.19
UVSSA-208ENST00000511563 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
UVSSA-208ENST00000511563 LAMC3Q9Y6N6 1575 aa28.25■■■□□ 2.11
UVSSA-208ENST00000511563 NESP48681 1621 aa28.23■■■□□ 2.11
UVSSA-208ENST00000511563 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
UVSSA-208ENST00000511563 ERCC6Q03468 1493 aa28.16■■■□□ 2.1
UVSSA-208ENST00000511563 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.09
UVSSA-208ENST00000511563 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
UVSSA-208ENST00000511563 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
UVSSA-208ENST00000511563 CFTRP13569 1480 aa28.02■■■□□ 2.08
UVSSA-208ENST00000511563 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
UVSSA-208ENST00000511563 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
UVSSA-208ENST00000511563 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
UVSSA-208ENST00000511563 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
UVSSA-208ENST00000511563 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
UVSSA-208ENST00000511563 CUX2O14529 1486 aa27.81■■■□□ 2.04
UVSSA-208ENST00000511563 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.03
UVSSA-208ENST00000511563 WDR62O43379 1518 aa27.65■■■□□ 2.02
UVSSA-208ENST00000511563 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
UVSSA-208ENST00000511563 ABCC8Q09428 1581 aa27.47■■□□□ 1.99
UVSSA-208ENST00000511563 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
UVSSA-208ENST00000511563 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
UVSSA-208ENST00000511563 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
UVSSA-208ENST00000511563 CUX1P39880 1505 aa27.24■■□□□ 1.95
UVSSA-208ENST00000511563 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
UVSSA-208ENST00000511563 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
UVSSA-208ENST00000511563 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.941e-6■■■■■ 58.5
UVSSA-208ENST00000511563 TARBP1Q13395 1621 aaKnown RBP27.09■■□□□ 1.93
UVSSA-208ENST00000511563 SOGA1O94964 1423 aa27.09■■□□□ 1.93
UVSSA-208ENST00000511563 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
UVSSA-208ENST00000511563 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
UVSSA-208ENST00000511563 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
UVSSA-208ENST00000511563 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
UVSSA-208ENST00000511563 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
UVSSA-208ENST00000511563 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
UVSSA-208ENST00000511563 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
UVSSA-208ENST00000511563 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.92e-7■■□□□ 12.5
UVSSA-208ENST00000511563 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
UVSSA-208ENST00000511563 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.9
UVSSA-208ENST00000511563 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
UVSSA-208ENST00000511563 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
UVSSA-208ENST00000511563 GRIN2BQ13224 1484 aa26.77■■□□□ 1.88
UVSSA-208ENST00000511563 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
UVSSA-208ENST00000511563 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
UVSSA-208ENST00000511563 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
UVSSA-208ENST00000511563 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
UVSSA-208ENST00000511563 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
UVSSA-208ENST00000511563 CHD1O14646 1710 aa26.63■■□□□ 1.85
UVSSA-208ENST00000511563 FBLN2P98095 1184 aa26.62■■□□□ 1.85
UVSSA-208ENST00000511563 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
UVSSA-208ENST00000511563 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
UVSSA-208ENST00000511563 KIF27Q86VH2 1401 aa26.59■■□□□ 1.85
UVSSA-208ENST00000511563 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
UVSSA-208ENST00000511563 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
UVSSA-208ENST00000511563 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
UVSSA-208ENST00000511563 FHAD1B1AJZ9 1412 aa26.49■■□□□ 1.83
UVSSA-208ENST00000511563 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
UVSSA-208ENST00000511563 CUL7Q14999 1698 aa26.4■■□□□ 1.82
UVSSA-208ENST00000511563 IGF1RP08069 1367 aa26.39■■□□□ 1.82
UVSSA-208ENST00000511563 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
UVSSA-208ENST00000511563 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
UVSSA-208ENST00000511563 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
UVSSA-208ENST00000511563 NUP160Q12769 1436 aa26.29■■□□□ 1.8
UVSSA-208ENST00000511563 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
UVSSA-208ENST00000511563 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
UVSSA-208ENST00000511563 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
UVSSA-208ENST00000511563 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
UVSSA-208ENST00000511563 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
UVSSA-208ENST00000511563 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
UVSSA-208ENST00000511563 EEA1Q15075 1411 aa26.18■■□□□ 1.78
UVSSA-208ENST00000511563 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
UVSSA-208ENST00000511563 KIAA0586Q9BVV6 1533 aa26.08■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms