RNA–Protein interactions for RNA: ENST00000511463.1

APBB3-218, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-218ENST00000511463 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
APBB3-218ENST00000511463 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
APBB3-218ENST00000511463 ABCC9O60706 1549 aa38.13■■■■□ 3.69
APBB3-218ENST00000511463 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
APBB3-218ENST00000511463 NACADO15069 1562 aa36.74■■■■□ 3.47
APBB3-218ENST00000511463 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
APBB3-218ENST00000511463 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
APBB3-218ENST00000511463 MYO15BQ96JP2 1530 aa36.55■■■■□ 3.44
APBB3-218ENST00000511463 DCAF1Q9Y4B6 1507 aa36.44■■■■□ 3.42
APBB3-218ENST00000511463 UNC13AQ9UPW8 1703 aa35.95■■■■□ 3.35
APBB3-218ENST00000511463 SCRIBQ14160 1630 aa35.69■■■■□ 3.3
APBB3-218ENST00000511463 BICRAQ9NZM4 1560 aa35.63■■■■□ 3.29
APBB3-218ENST00000511463 PABPN1Q86U42 306 aaKnown RBP eCLIP35.58■■■■□ 3.29
APBB3-218ENST00000511463 SHROOM4Q9ULL8 1493 aa35.33■■■■□ 3.25
APBB3-218ENST00000511463 DNAJC5BQ9UF47 199 aa34.8■■■■□ 3.16
APBB3-218ENST00000511463 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.15
APBB3-218ENST00000511463 CC2D2AQ9P2K1 1620 aa34.53■■■■□ 3.12
APBB3-218ENST00000511463 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
APBB3-218ENST00000511463 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
APBB3-218ENST00000511463 BAZ1AQ9NRL2 1556 aaPredicted RBP34.12■■■■□ 3.05
APBB3-218ENST00000511463 SMARCA2P51531 1590 aa33.9■■■■□ 3.02
APBB3-218ENST00000511463 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
APBB3-218ENST00000511463 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
APBB3-218ENST00000511463 NCAPD3P42695 1498 aa33.86■■■■□ 3.01
APBB3-218ENST00000511463 PEG3Q9GZU2 1588 aa33.82■■■■□ 3
APBB3-218ENST00000511463 HMGXB3Q12766 1538 aa33.77■■■■□ 3
APBB3-218ENST00000511463 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
APBB3-218ENST00000511463 WIZO95785 1651 aa33.55■■■□□ 2.96
APBB3-218ENST00000511463 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.95
APBB3-218ENST00000511463 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
APBB3-218ENST00000511463 LAMC3Q9Y6N6 1575 aa33.02■■■□□ 2.88
APBB3-218ENST00000511463 NESP48681 1621 aa33.01■■■□□ 2.87
APBB3-218ENST00000511463 ERCC6Q03468 1493 aa32.89■■■□□ 2.86
APBB3-218ENST00000511463 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
APBB3-218ENST00000511463 CCDC88BA6NC98 1476 aa32.78■■■□□ 2.84
APBB3-218ENST00000511463 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
APBB3-218ENST00000511463 CFTRP13569 1480 aa32.71■■■□□ 2.83
APBB3-218ENST00000511463 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.83
APBB3-218ENST00000511463 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
APBB3-218ENST00000511463 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
APBB3-218ENST00000511463 PRDM2Q13029 1718 aa32.57■■■□□ 2.81
APBB3-218ENST00000511463 CUX2O14529 1486 aa32.53■■■□□ 2.8
APBB3-218ENST00000511463 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
APBB3-218ENST00000511463 CEP164Q9UPV0 1460 aa32.5■■■□□ 2.79
APBB3-218ENST00000511463 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
APBB3-218ENST00000511463 WDR62O43379 1518 aa32.34■■■□□ 2.77
APBB3-218ENST00000511463 URB2Q14146 1524 aaKnown RBP32.18■■■□□ 2.74
APBB3-218ENST00000511463 ABCC8Q09428 1581 aa32.03■■■□□ 2.72
APBB3-218ENST00000511463 DNMBPQ6XZF7 1577 aa32.02■■■□□ 2.72
APBB3-218ENST00000511463 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
APBB3-218ENST00000511463 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
APBB3-218ENST00000511463 CUX1P39880 1505 aa31.8■■■□□ 2.68
APBB3-218ENST00000511463 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
APBB3-218ENST00000511463 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
APBB3-218ENST00000511463 TARBP1Q13395 1621 aaKnown RBP31.68■■■□□ 2.66
APBB3-218ENST00000511463 WRNQ14191 1432 aaPredicted RBP eCLIP31.62■■■□□ 2.65
APBB3-218ENST00000511463 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
APBB3-218ENST00000511463 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
APBB3-218ENST00000511463 SOGA1O94964 1423 aa31.58■■■□□ 2.65
APBB3-218ENST00000511463 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
APBB3-218ENST00000511463 EIF4G3O43432 1585 aaKnown RBP31.58■■■□□ 2.65
APBB3-218ENST00000511463 SYNJ1O43426 1573 aa31.57■■■□□ 2.64
APBB3-218ENST00000511463 RAD54L2Q9Y4B4 1467 aa31.57■■■□□ 2.64
APBB3-218ENST00000511463 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
APBB3-218ENST00000511463 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.621e-6■■■■■ 41.6
APBB3-218ENST00000511463 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.61
APBB3-218ENST00000511463 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
APBB3-218ENST00000511463 DNAJC5Q9H3Z4 198 aa31.31■■■□□ 2.6
APBB3-218ENST00000511463 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
APBB3-218ENST00000511463 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
APBB3-218ENST00000511463 GAPVD1Q14C86 1478 aa31.25■■■□□ 2.59
APBB3-218ENST00000511463 GRIN2BQ13224 1484 aa31.24■■■□□ 2.59
APBB3-218ENST00000511463 SNAPC4Q5SXM2 1469 aa31.2■■■□□ 2.58
APBB3-218ENST00000511463 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
APBB3-218ENST00000511463 CHD1O14646 1710 aa31.15■■■□□ 2.58
APBB3-218ENST00000511463 OSCARQ8IYS5 282 aa31.1■■■□□ 2.57
APBB3-218ENST00000511463 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
APBB3-218ENST00000511463 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
APBB3-218ENST00000511463 FBLN2P98095 1184 aa31.01■■■□□ 2.55
APBB3-218ENST00000511463 ADAMTS12P58397 1594 aa31■■■□□ 2.55
APBB3-218ENST00000511463 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
APBB3-218ENST00000511463 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
APBB3-218ENST00000511463 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
APBB3-218ENST00000511463 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
APBB3-218ENST00000511463 GRIN2AQ12879 1464 aa30.85■■■□□ 2.53
APBB3-218ENST00000511463 CUL7Q14999 1698 aa30.81■■■□□ 2.52
APBB3-218ENST00000511463 CLASP1Q7Z460 1538 aa30.8■■■□□ 2.52
APBB3-218ENST00000511463 IGF1RP08069 1367 aa30.76■■■□□ 2.51
APBB3-218ENST00000511463 NUP160Q12769 1436 aa30.7■■■□□ 2.5
APBB3-218ENST00000511463 CEP170Q5SW79 1584 aa30.7■■■□□ 2.5
APBB3-218ENST00000511463 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
APBB3-218ENST00000511463 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
APBB3-218ENST00000511463 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
APBB3-218ENST00000511463 ARHGEF11O15085 1522 aa30.68■■■□□ 2.5
APBB3-218ENST00000511463 RUSC2Q8N2Y8 1516 aa30.65■■■□□ 2.5
APBB3-218ENST00000511463 CARMIL1Q5VZK9 1371 aa30.6■■■□□ 2.49
APBB3-218ENST00000511463 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
APBB3-218ENST00000511463 SHROOM2Q13796 1616 aa30.49■■■□□ 2.47
APBB3-218ENST00000511463 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
APBB3-218ENST00000511463 EEA1Q15075 1411 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms