RNA–Protein interactions for RNA: ENST00000511398.1

LNX1-207, Transcript of ligand of numb-protein X 1, humanhuman

TSL 4

Gene LNX1, Length 622 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1-207ENST00000511398 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
LNX1-207ENST00000511398 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
LNX1-207ENST00000511398 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
LNX1-207ENST00000511398 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
LNX1-207ENST00000511398 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
LNX1-207ENST00000511398 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
LNX1-207ENST00000511398 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
LNX1-207ENST00000511398 ABCC9O60706 1549 aa16.47■□□□□ 0.23
LNX1-207ENST00000511398 FOXD1Q16676 465 aa16.32■□□□□ 0.2
LNX1-207ENST00000511398 ADRA2BP18089 450 aa15.71■□□□□ 0.11
LNX1-207ENST00000511398 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
LNX1-207ENST00000511398 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
LNX1-207ENST00000511398 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
LNX1-207ENST00000511398 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
LNX1-207ENST00000511398 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
LNX1-207ENST00000511398 NACADO15069 1562 aa15.44■□□□□ 0.06
LNX1-207ENST00000511398 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
LNX1-207ENST00000511398 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
LNX1-207ENST00000511398 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
LNX1-207ENST00000511398 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
LNX1-207ENST00000511398 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
LNX1-207ENST00000511398 MSH5O43196 834 aa15.15■□□□□ 0.02
LNX1-207ENST00000511398 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
LNX1-207ENST00000511398 SCRIBQ14160 1630 aa15.06■□□□□ 0
LNX1-207ENST00000511398 KCNA4P22459 653 aa15□□□□□ -0.01
LNX1-207ENST00000511398 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
LNX1-207ENST00000511398 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
LNX1-207ENST00000511398 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
LNX1-207ENST00000511398 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
LNX1-207ENST00000511398 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
LNX1-207ENST00000511398 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
LNX1-207ENST00000511398 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
LNX1-207ENST00000511398 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
LNX1-207ENST00000511398 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
LNX1-207ENST00000511398 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
LNX1-207ENST00000511398 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
LNX1-207ENST00000511398 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
LNX1-207ENST00000511398 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
LNX1-207ENST00000511398 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
LNX1-207ENST00000511398 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
LNX1-207ENST00000511398 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
LNX1-207ENST00000511398 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
LNX1-207ENST00000511398 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
LNX1-207ENST00000511398 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
LNX1-207ENST00000511398 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
LNX1-207ENST00000511398 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
LNX1-207ENST00000511398 WIZO95785 1651 aa14.18□□□□□ -0.14
LNX1-207ENST00000511398 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
LNX1-207ENST00000511398 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
LNX1-207ENST00000511398 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
LNX1-207ENST00000511398 NESP48681 1621 aa14.12□□□□□ -0.15
LNX1-207ENST00000511398 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
LNX1-207ENST00000511398 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
LNX1-207ENST00000511398 CUX2O14529 1486 aa14.1□□□□□ -0.15
LNX1-207ENST00000511398 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
LNX1-207ENST00000511398 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
LNX1-207ENST00000511398 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
LNX1-207ENST00000511398 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
LNX1-207ENST00000511398 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
LNX1-207ENST00000511398 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
LNX1-207ENST00000511398 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.18
LNX1-207ENST00000511398 ZBTB22O15209 634 aa13.85□□□□□ -0.19
LNX1-207ENST00000511398 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
LNX1-207ENST00000511398 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
LNX1-207ENST00000511398 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
LNX1-207ENST00000511398 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
LNX1-207ENST00000511398 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
LNX1-207ENST00000511398 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
LNX1-207ENST00000511398 CFTRP13569 1480 aa13.73□□□□□ -0.21
LNX1-207ENST00000511398 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
LNX1-207ENST00000511398 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
LNX1-207ENST00000511398 WDR62O43379 1518 aa13.7□□□□□ -0.22
LNX1-207ENST00000511398 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
LNX1-207ENST00000511398 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
LNX1-207ENST00000511398 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
LNX1-207ENST00000511398 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
LNX1-207ENST00000511398 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
LNX1-207ENST00000511398 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
LNX1-207ENST00000511398 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
LNX1-207ENST00000511398 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
LNX1-207ENST00000511398 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
LNX1-207ENST00000511398 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
LNX1-207ENST00000511398 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
LNX1-207ENST00000511398 FBLN2P98095 1184 aa13.39□□□□□ -0.27
LNX1-207ENST00000511398 CUX1P39880 1505 aa13.39□□□□□ -0.27
LNX1-207ENST00000511398 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
LNX1-207ENST00000511398 BIVM-ERCC5R4GMW8 1640 aa13.36□□□□□ -0.27
LNX1-207ENST00000511398 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
LNX1-207ENST00000511398 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
LNX1-207ENST00000511398 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.27
LNX1-207ENST00000511398 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
LNX1-207ENST00000511398 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
LNX1-207ENST00000511398 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
LNX1-207ENST00000511398 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
LNX1-207ENST00000511398 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
LNX1-207ENST00000511398 SOGA1O94964 1423 aa13.3□□□□□ -0.28
LNX1-207ENST00000511398 CHD1O14646 1710 aa13.3□□□□□ -0.28
LNX1-207ENST00000511398 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
LNX1-207ENST00000511398 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
LNX1-207ENST00000511398 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms