RNA–Protein interactions for RNA: ENST00000510491.5

COPB2-207, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-207ENST00000510491 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
COPB2-207ENST00000510491 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
COPB2-207ENST00000510491 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
COPB2-207ENST00000510491 ABCC9O60706 1549 aa18.63■□□□□ 0.57
COPB2-207ENST00000510491 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
COPB2-207ENST00000510491 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
COPB2-207ENST00000510491 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
COPB2-207ENST00000510491 NACADO15069 1562 aa18.28■□□□□ 0.52
COPB2-207ENST00000510491 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
COPB2-207ENST00000510491 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
COPB2-207ENST00000510491 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
COPB2-207ENST00000510491 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
COPB2-207ENST00000510491 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
COPB2-207ENST00000510491 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
COPB2-207ENST00000510491 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
COPB2-207ENST00000510491 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
COPB2-207ENST00000510491 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
COPB2-207ENST00000510491 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
COPB2-207ENST00000510491 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
COPB2-207ENST00000510491 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
COPB2-207ENST00000510491 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
COPB2-207ENST00000510491 WIZO95785 1651 aa17.17■□□□□ 0.34
COPB2-207ENST00000510491 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
COPB2-207ENST00000510491 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
COPB2-207ENST00000510491 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
COPB2-207ENST00000510491 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
COPB2-207ENST00000510491 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
COPB2-207ENST00000510491 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
COPB2-207ENST00000510491 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
COPB2-207ENST00000510491 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
COPB2-207ENST00000510491 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
COPB2-207ENST00000510491 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
COPB2-207ENST00000510491 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
COPB2-207ENST00000510491 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
COPB2-207ENST00000510491 CFTRP13569 1480 aa16.53■□□□□ 0.24
COPB2-207ENST00000510491 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
COPB2-207ENST00000510491 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
COPB2-207ENST00000510491 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
COPB2-207ENST00000510491 NESP48681 1621 aa16.36■□□□□ 0.21
COPB2-207ENST00000510491 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
COPB2-207ENST00000510491 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
COPB2-207ENST00000510491 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
COPB2-207ENST00000510491 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
COPB2-207ENST00000510491 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
COPB2-207ENST00000510491 CUX1P39880 1505 aa16.25■□□□□ 0.19
COPB2-207ENST00000510491 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
COPB2-207ENST00000510491 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
COPB2-207ENST00000510491 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
COPB2-207ENST00000510491 SOGA1O94964 1423 aa16.17■□□□□ 0.18
COPB2-207ENST00000510491 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
COPB2-207ENST00000510491 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
COPB2-207ENST00000510491 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
COPB2-207ENST00000510491 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
COPB2-207ENST00000510491 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
COPB2-207ENST00000510491 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
COPB2-207ENST00000510491 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
COPB2-207ENST00000510491 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
COPB2-207ENST00000510491 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
COPB2-207ENST00000510491 EEA1Q15075 1411 aa16.03■□□□□ 0.16
COPB2-207ENST00000510491 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
COPB2-207ENST00000510491 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
COPB2-207ENST00000510491 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
COPB2-207ENST00000510491 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
COPB2-207ENST00000510491 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
COPB2-207ENST00000510491 WDR62O43379 1518 aa15.93■□□□□ 0.14
COPB2-207ENST00000510491 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
COPB2-207ENST00000510491 CUX2O14529 1486 aa15.91■□□□□ 0.14
COPB2-207ENST00000510491 THOC2Q8NI27 1593 aaKnown RBP15.9■□□□□ 0.14
COPB2-207ENST00000510491 IGF1RP08069 1367 aa15.89■□□□□ 0.13
COPB2-207ENST00000510491 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
COPB2-207ENST00000510491 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
COPB2-207ENST00000510491 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
COPB2-207ENST00000510491 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
COPB2-207ENST00000510491 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
COPB2-207ENST00000510491 KIF21BO75037 1637 aa15.83■□□□□ 0.13
COPB2-207ENST00000510491 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
COPB2-207ENST00000510491 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
COPB2-207ENST00000510491 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
COPB2-207ENST00000510491 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
COPB2-207ENST00000510491 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
COPB2-207ENST00000510491 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
COPB2-207ENST00000510491 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
COPB2-207ENST00000510491 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
COPB2-207ENST00000510491 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
COPB2-207ENST00000510491 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
COPB2-207ENST00000510491 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.116e-7■■□□□ 11.9
COPB2-207ENST00000510491 UBTFP17480 764 aaKnown RBP15.69■□□□□ 0.1
COPB2-207ENST00000510491 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
COPB2-207ENST00000510491 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
COPB2-207ENST00000510491 CUL7Q14999 1698 aa15.63■□□□□ 0.09
COPB2-207ENST00000510491 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
COPB2-207ENST00000510491 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
COPB2-207ENST00000510491 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
COPB2-207ENST00000510491 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
COPB2-207ENST00000510491 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
COPB2-207ENST00000510491 CLIP1P30622 1438 aa15.56■□□□□ 0.08
COPB2-207ENST00000510491 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
COPB2-207ENST00000510491 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
COPB2-207ENST00000510491 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
COPB2-207ENST00000510491 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms