RNA–Protein interactions for RNA: ENST00000510476.5

SPOP-217, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 3

Gene SPOP, Length 773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-217ENST00000510476 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
SPOP-217ENST00000510476 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
SPOP-217ENST00000510476 ABCC9O60706 1549 aa20.12■□□□□ 0.81
SPOP-217ENST00000510476 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
SPOP-217ENST00000510476 NACADO15069 1562 aa19.3■□□□□ 0.68
SPOP-217ENST00000510476 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
SPOP-217ENST00000510476 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
SPOP-217ENST00000510476 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
SPOP-217ENST00000510476 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
SPOP-217ENST00000510476 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
SPOP-217ENST00000510476 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
SPOP-217ENST00000510476 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
SPOP-217ENST00000510476 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
SPOP-217ENST00000510476 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
SPOP-217ENST00000510476 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
SPOP-217ENST00000510476 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
SPOP-217ENST00000510476 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
SPOP-217ENST00000510476 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SPOP-217ENST00000510476 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
SPOP-217ENST00000510476 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SPOP-217ENST00000510476 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
SPOP-217ENST00000510476 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
SPOP-217ENST00000510476 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
SPOP-217ENST00000510476 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
SPOP-217ENST00000510476 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
SPOP-217ENST00000510476 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
SPOP-217ENST00000510476 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
SPOP-217ENST00000510476 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
SPOP-217ENST00000510476 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
SPOP-217ENST00000510476 WIZO95785 1651 aa17.62■□□□□ 0.41
SPOP-217ENST00000510476 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
SPOP-217ENST00000510476 NESP48681 1621 aa17.43■□□□□ 0.38
SPOP-217ENST00000510476 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
SPOP-217ENST00000510476 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
SPOP-217ENST00000510476 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
SPOP-217ENST00000510476 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
SPOP-217ENST00000510476 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
SPOP-217ENST00000510476 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
SPOP-217ENST00000510476 CUX2O14529 1486 aa17.19■□□□□ 0.34
SPOP-217ENST00000510476 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
SPOP-217ENST00000510476 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
SPOP-217ENST00000510476 CFTRP13569 1480 aa17.16■□□□□ 0.34
SPOP-217ENST00000510476 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
SPOP-217ENST00000510476 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
SPOP-217ENST00000510476 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
SPOP-217ENST00000510476 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
SPOP-217ENST00000510476 WDR62O43379 1518 aa17.05■□□□□ 0.32
SPOP-217ENST00000510476 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
SPOP-217ENST00000510476 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
SPOP-217ENST00000510476 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
SPOP-217ENST00000510476 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
SPOP-217ENST00000510476 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
SPOP-217ENST00000510476 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
SPOP-217ENST00000510476 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
SPOP-217ENST00000510476 CUX1P39880 1505 aa16.69■□□□□ 0.26
SPOP-217ENST00000510476 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
SPOP-217ENST00000510476 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
SPOP-217ENST00000510476 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
SPOP-217ENST00000510476 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
SPOP-217ENST00000510476 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
SPOP-217ENST00000510476 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
SPOP-217ENST00000510476 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
SPOP-217ENST00000510476 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
SPOP-217ENST00000510476 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
SPOP-217ENST00000510476 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
SPOP-217ENST00000510476 SOGA1O94964 1423 aa16.53■□□□□ 0.24
SPOP-217ENST00000510476 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.232e-7■■■■□ 26.5
SPOP-217ENST00000510476 CHD1O14646 1710 aa16.48■□□□□ 0.23
SPOP-217ENST00000510476 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
SPOP-217ENST00000510476 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
SPOP-217ENST00000510476 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
SPOP-217ENST00000510476 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
SPOP-217ENST00000510476 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
SPOP-217ENST00000510476 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
SPOP-217ENST00000510476 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
SPOP-217ENST00000510476 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
SPOP-217ENST00000510476 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SPOP-217ENST00000510476 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
SPOP-217ENST00000510476 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
SPOP-217ENST00000510476 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
SPOP-217ENST00000510476 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.2
SPOP-217ENST00000510476 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.2
SPOP-217ENST00000510476 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.2
SPOP-217ENST00000510476 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
SPOP-217ENST00000510476 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
SPOP-217ENST00000510476 ARHGEF11O15085 1522 aa16.23■□□□□ 0.19
SPOP-217ENST00000510476 FBLN2P98095 1184 aa16.22■□□□□ 0.19
SPOP-217ENST00000510476 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
SPOP-217ENST00000510476 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
SPOP-217ENST00000510476 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
SPOP-217ENST00000510476 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
SPOP-217ENST00000510476 NUP160Q12769 1436 aa16.13■□□□□ 0.17
SPOP-217ENST00000510476 CUL7Q14999 1698 aa16.12■□□□□ 0.17
SPOP-217ENST00000510476 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
SPOP-217ENST00000510476 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
SPOP-217ENST00000510476 SHROOM2Q13796 1616 aa16.08■□□□□ 0.17
SPOP-217ENST00000510476 IGF1RP08069 1367 aa16.07■□□□□ 0.16
SPOP-217ENST00000510476 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
SPOP-217ENST00000510476 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
SPOP-217ENST00000510476 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms