RNA–Protein interactions for RNA: ENST00000510038.1

H2AFY-215, Transcript of H2A histone family member Y, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFY, Length 1,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-215ENST00000510038 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
H2AFY-215ENST00000510038 ABCC9O60706 1549 aa21.2■□□□□ 0.98
H2AFY-215ENST00000510038 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
H2AFY-215ENST00000510038 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
H2AFY-215ENST00000510038 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
H2AFY-215ENST00000510038 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.79
H2AFY-215ENST00000510038 NACADO15069 1562 aa20■□□□□ 0.79
H2AFY-215ENST00000510038 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
H2AFY-215ENST00000510038 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
H2AFY-215ENST00000510038 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
H2AFY-215ENST00000510038 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
H2AFY-215ENST00000510038 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
H2AFY-215ENST00000510038 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
H2AFY-215ENST00000510038 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
H2AFY-215ENST00000510038 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
H2AFY-215ENST00000510038 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
H2AFY-215ENST00000510038 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
H2AFY-215ENST00000510038 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.64
H2AFY-215ENST00000510038 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
H2AFY-215ENST00000510038 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
H2AFY-215ENST00000510038 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
H2AFY-215ENST00000510038 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
H2AFY-215ENST00000510038 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
H2AFY-215ENST00000510038 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
H2AFY-215ENST00000510038 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
H2AFY-215ENST00000510038 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.51
H2AFY-215ENST00000510038 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
H2AFY-215ENST00000510038 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
H2AFY-215ENST00000510038 NESP48681 1621 aa18.2■□□□□ 0.5
H2AFY-215ENST00000510038 CUX2O14529 1486 aa18.19■□□□□ 0.5
H2AFY-215ENST00000510038 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
H2AFY-215ENST00000510038 PDS5BQ9NTI5 1447 aa18.05■□□□□ 0.48
H2AFY-215ENST00000510038 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
H2AFY-215ENST00000510038 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
H2AFY-215ENST00000510038 WIZO95785 1651 aa17.95■□□□□ 0.46
H2AFY-215ENST00000510038 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
H2AFY-215ENST00000510038 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
H2AFY-215ENST00000510038 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
H2AFY-215ENST00000510038 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
H2AFY-215ENST00000510038 CFTRP13569 1480 aa17.77■□□□□ 0.43
H2AFY-215ENST00000510038 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
H2AFY-215ENST00000510038 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
H2AFY-215ENST00000510038 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
H2AFY-215ENST00000510038 WDR62O43379 1518 aa17.67■□□□□ 0.42
H2AFY-215ENST00000510038 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
H2AFY-215ENST00000510038 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
H2AFY-215ENST00000510038 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
H2AFY-215ENST00000510038 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
H2AFY-215ENST00000510038 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
H2AFY-215ENST00000510038 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
H2AFY-215ENST00000510038 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
H2AFY-215ENST00000510038 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
H2AFY-215ENST00000510038 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
H2AFY-215ENST00000510038 FBLN2P98095 1184 aa17.33■□□□□ 0.36
H2AFY-215ENST00000510038 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
H2AFY-215ENST00000510038 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.369e-7■■■■□ 21.4
H2AFY-215ENST00000510038 SOGA1O94964 1423 aa17.27■□□□□ 0.36
H2AFY-215ENST00000510038 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.36
H2AFY-215ENST00000510038 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
H2AFY-215ENST00000510038 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
H2AFY-215ENST00000510038 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
H2AFY-215ENST00000510038 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
H2AFY-215ENST00000510038 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
H2AFY-215ENST00000510038 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
H2AFY-215ENST00000510038 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
H2AFY-215ENST00000510038 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
H2AFY-215ENST00000510038 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
H2AFY-215ENST00000510038 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
H2AFY-215ENST00000510038 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
H2AFY-215ENST00000510038 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
H2AFY-215ENST00000510038 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
H2AFY-215ENST00000510038 CUX1P39880 1505 aa17.08■□□□□ 0.32
H2AFY-215ENST00000510038 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
H2AFY-215ENST00000510038 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
H2AFY-215ENST00000510038 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
H2AFY-215ENST00000510038 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
H2AFY-215ENST00000510038 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
H2AFY-215ENST00000510038 CHD1O14646 1710 aa16.98■□□□□ 0.31
H2AFY-215ENST00000510038 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
H2AFY-215ENST00000510038 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
H2AFY-215ENST00000510038 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
H2AFY-215ENST00000510038 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
H2AFY-215ENST00000510038 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
H2AFY-215ENST00000510038 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
H2AFY-215ENST00000510038 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
H2AFY-215ENST00000510038 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
H2AFY-215ENST00000510038 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
H2AFY-215ENST00000510038 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
H2AFY-215ENST00000510038 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
H2AFY-215ENST00000510038 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
H2AFY-215ENST00000510038 GRIN2AQ12879 1464 aa16.77■□□□□ 0.27
H2AFY-215ENST00000510038 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
H2AFY-215ENST00000510038 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
H2AFY-215ENST00000510038 NUP160Q12769 1436 aa16.72■□□□□ 0.27
H2AFY-215ENST00000510038 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
H2AFY-215ENST00000510038 IGF1RP08069 1367 aa16.68■□□□□ 0.26
H2AFY-215ENST00000510038 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
H2AFY-215ENST00000510038 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
H2AFY-215ENST00000510038 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
H2AFY-215ENST00000510038 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms