RNA–Protein interactions for RNA: ENST00000509933.1

PSMG4-210, Transcript of proteasome assembly chaperone 4, humanhuman

TSL 2

Gene PSMG4, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMG4-210ENST00000509933 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
PSMG4-210ENST00000509933 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
PSMG4-210ENST00000509933 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
PSMG4-210ENST00000509933 ABCC9O60706 1549 aa27.57■■■□□ 2
PSMG4-210ENST00000509933 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
PSMG4-210ENST00000509933 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
PSMG4-210ENST00000509933 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
PSMG4-210ENST00000509933 MYO15BQ96JP2 1530 aa26.91■■□□□ 1.9
PSMG4-210ENST00000509933 NACADO15069 1562 aa26.87■■□□□ 1.89
PSMG4-210ENST00000509933 RB1CC1Q8TDY2 1594 aa26.72■■□□□ 1.87
PSMG4-210ENST00000509933 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
PSMG4-210ENST00000509933 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
PSMG4-210ENST00000509933 PABPN1Q86U42 306 aaKnown RBP eCLIP26■■□□□ 1.75
PSMG4-210ENST00000509933 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
PSMG4-210ENST00000509933 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
PSMG4-210ENST00000509933 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
PSMG4-210ENST00000509933 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
PSMG4-210ENST00000509933 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
PSMG4-210ENST00000509933 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
PSMG4-210ENST00000509933 SMARCA4P51532 1647 aa25.4■■□□□ 1.66
PSMG4-210ENST00000509933 WIZO95785 1651 aa25.32■■□□□ 1.64
PSMG4-210ENST00000509933 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.63
PSMG4-210ENST00000509933 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
PSMG4-210ENST00000509933 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
PSMG4-210ENST00000509933 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
PSMG4-210ENST00000509933 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
PSMG4-210ENST00000509933 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
PSMG4-210ENST00000509933 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
PSMG4-210ENST00000509933 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
PSMG4-210ENST00000509933 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
PSMG4-210ENST00000509933 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
PSMG4-210ENST00000509933 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
PSMG4-210ENST00000509933 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
PSMG4-210ENST00000509933 CFTRP13569 1480 aa24.24■■□□□ 1.47
PSMG4-210ENST00000509933 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
PSMG4-210ENST00000509933 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
PSMG4-210ENST00000509933 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
PSMG4-210ENST00000509933 NESP48681 1621 aa24.15■■□□□ 1.46
PSMG4-210ENST00000509933 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
PSMG4-210ENST00000509933 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
PSMG4-210ENST00000509933 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
PSMG4-210ENST00000509933 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
PSMG4-210ENST00000509933 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
PSMG4-210ENST00000509933 CUX1P39880 1505 aa23.86■■□□□ 1.41
PSMG4-210ENST00000509933 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
PSMG4-210ENST00000509933 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
PSMG4-210ENST00000509933 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
PSMG4-210ENST00000509933 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
PSMG4-210ENST00000509933 KIF21AQ7Z4S6 1674 aa23.82■■□□□ 1.4
PSMG4-210ENST00000509933 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
PSMG4-210ENST00000509933 SOGA1O94964 1423 aa23.72■■□□□ 1.39
PSMG4-210ENST00000509933 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
PSMG4-210ENST00000509933 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
PSMG4-210ENST00000509933 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
PSMG4-210ENST00000509933 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
PSMG4-210ENST00000509933 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
PSMG4-210ENST00000509933 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.37
PSMG4-210ENST00000509933 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
PSMG4-210ENST00000509933 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
PSMG4-210ENST00000509933 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
PSMG4-210ENST00000509933 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
PSMG4-210ENST00000509933 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
PSMG4-210ENST00000509933 EEA1Q15075 1411 aa23.49■■□□□ 1.35
PSMG4-210ENST00000509933 CSRNP3Q8WYN3 585 aa23.48■■□□□ 1.35
PSMG4-210ENST00000509933 CUX2O14529 1486 aa23.45■■□□□ 1.35
PSMG4-210ENST00000509933 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
PSMG4-210ENST00000509933 WDR62O43379 1518 aa23.44■■□□□ 1.34
PSMG4-210ENST00000509933 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
PSMG4-210ENST00000509933 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
PSMG4-210ENST00000509933 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
PSMG4-210ENST00000509933 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
PSMG4-210ENST00000509933 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
PSMG4-210ENST00000509933 IGF1RP08069 1367 aa23.26■■□□□ 1.31
PSMG4-210ENST00000509933 KIF21BO75037 1637 aa23.24■■□□□ 1.31
PSMG4-210ENST00000509933 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
PSMG4-210ENST00000509933 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
PSMG4-210ENST00000509933 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
PSMG4-210ENST00000509933 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
PSMG4-210ENST00000509933 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
PSMG4-210ENST00000509933 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
PSMG4-210ENST00000509933 ZNF608Q9ULD9 1512 aaPredicted RBP23.21■■□□□ 1.31
PSMG4-210ENST00000509933 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
PSMG4-210ENST00000509933 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
PSMG4-210ENST00000509933 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
PSMG4-210ENST00000509933 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
PSMG4-210ENST00000509933 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
PSMG4-210ENST00000509933 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
PSMG4-210ENST00000509933 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
PSMG4-210ENST00000509933 CUL7Q14999 1698 aa23.05■■□□□ 1.28
PSMG4-210ENST00000509933 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
PSMG4-210ENST00000509933 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
PSMG4-210ENST00000509933 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
PSMG4-210ENST00000509933 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
PSMG4-210ENST00000509933 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
PSMG4-210ENST00000509933 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
PSMG4-210ENST00000509933 CLIP1P30622 1438 aa22.88■■□□□ 1.25
PSMG4-210ENST00000509933 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
PSMG4-210ENST00000509933 FBLN2P98095 1184 aa22.83■■□□□ 1.25
PSMG4-210ENST00000509933 CTTNBP2Q8WZ74 1663 aa22.8■■□□□ 1.24
PSMG4-210ENST00000509933 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms