RNA–Protein interactions for RNA: ENST00000509385.1

TOB1-203, Transcript of transducer of ERBB2, 1, humanhuman

TSL 2

Gene TOB1, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB1-203ENST00000509385 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
TOB1-203ENST00000509385 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
TOB1-203ENST00000509385 ABCC9O60706 1549 aa31.81■■■□□ 2.68
TOB1-203ENST00000509385 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
TOB1-203ENST00000509385 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
TOB1-203ENST00000509385 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
TOB1-203ENST00000509385 NACADO15069 1562 aa30.54■■■□□ 2.48
TOB1-203ENST00000509385 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
TOB1-203ENST00000509385 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
TOB1-203ENST00000509385 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
TOB1-203ENST00000509385 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
TOB1-203ENST00000509385 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
TOB1-203ENST00000509385 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
TOB1-203ENST00000509385 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
TOB1-203ENST00000509385 DNAJC5BQ9UF47 199 aa28.99■■■□□ 2.23
TOB1-203ENST00000509385 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
TOB1-203ENST00000509385 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
TOB1-203ENST00000509385 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
TOB1-203ENST00000509385 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
TOB1-203ENST00000509385 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
TOB1-203ENST00000509385 MROH2BQ7Z745 1585 aa28.35■■■□□ 2.13
TOB1-203ENST00000509385 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
TOB1-203ENST00000509385 SMARCA2P51531 1590 aa28.23■■■□□ 2.11
TOB1-203ENST00000509385 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
TOB1-203ENST00000509385 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
TOB1-203ENST00000509385 WIZO95785 1651 aa28.09■■■□□ 2.09
TOB1-203ENST00000509385 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
TOB1-203ENST00000509385 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
TOB1-203ENST00000509385 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
TOB1-203ENST00000509385 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
TOB1-203ENST00000509385 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
TOB1-203ENST00000509385 NESP48681 1621 aa27.56■■■□□ 2
TOB1-203ENST00000509385 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
TOB1-203ENST00000509385 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
TOB1-203ENST00000509385 ERCC6Q03468 1493 aa27.42■■□□□ 1.98
TOB1-203ENST00000509385 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
TOB1-203ENST00000509385 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
TOB1-203ENST00000509385 CFTRP13569 1480 aa27.25■■□□□ 1.95
TOB1-203ENST00000509385 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
TOB1-203ENST00000509385 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
TOB1-203ENST00000509385 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
TOB1-203ENST00000509385 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
TOB1-203ENST00000509385 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
TOB1-203ENST00000509385 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
TOB1-203ENST00000509385 CUX2O14529 1486 aa26.93■■□□□ 1.9
TOB1-203ENST00000509385 DNAJC5Q9H3Z4 198 aa26.92■■□□□ 1.9
TOB1-203ENST00000509385 WDR62O43379 1518 aa26.85■■□□□ 1.89
TOB1-203ENST00000509385 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
TOB1-203ENST00000509385 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
TOB1-203ENST00000509385 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
TOB1-203ENST00000509385 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
TOB1-203ENST00000509385 CUX1P39880 1505 aa26.58■■□□□ 1.85
TOB1-203ENST00000509385 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
TOB1-203ENST00000509385 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
TOB1-203ENST00000509385 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
TOB1-203ENST00000509385 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
TOB1-203ENST00000509385 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
TOB1-203ENST00000509385 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
TOB1-203ENST00000509385 SOGA1O94964 1423 aa26.42■■□□□ 1.82
TOB1-203ENST00000509385 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
TOB1-203ENST00000509385 TOP2BQ02880 1626 aa26.37■■□□□ 1.81
TOB1-203ENST00000509385 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
TOB1-203ENST00000509385 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
TOB1-203ENST00000509385 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.85e-6■■□□□ 13.9
TOB1-203ENST00000509385 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
TOB1-203ENST00000509385 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
TOB1-203ENST00000509385 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
TOB1-203ENST00000509385 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
TOB1-203ENST00000509385 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
TOB1-203ENST00000509385 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
TOB1-203ENST00000509385 FBLN2P98095 1184 aa26.06■■□□□ 1.76
TOB1-203ENST00000509385 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
TOB1-203ENST00000509385 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
TOB1-203ENST00000509385 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
TOB1-203ENST00000509385 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
TOB1-203ENST00000509385 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
TOB1-203ENST00000509385 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
TOB1-203ENST00000509385 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
TOB1-203ENST00000509385 CHD1O14646 1710 aa25.94■■□□□ 1.74
TOB1-203ENST00000509385 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
TOB1-203ENST00000509385 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
TOB1-203ENST00000509385 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
TOB1-203ENST00000509385 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
TOB1-203ENST00000509385 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
TOB1-203ENST00000509385 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
TOB1-203ENST00000509385 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
TOB1-203ENST00000509385 IGF1RP08069 1367 aa25.77■■□□□ 1.72
TOB1-203ENST00000509385 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
TOB1-203ENST00000509385 CUL7Q14999 1698 aa25.68■■□□□ 1.7
TOB1-203ENST00000509385 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
TOB1-203ENST00000509385 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
TOB1-203ENST00000509385 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
TOB1-203ENST00000509385 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
TOB1-203ENST00000509385 NUP160Q12769 1436 aa25.55■■□□□ 1.68
TOB1-203ENST00000509385 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
TOB1-203ENST00000509385 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
TOB1-203ENST00000509385 EEA1Q15075 1411 aa25.5■■□□□ 1.67
TOB1-203ENST00000509385 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
TOB1-203ENST00000509385 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
TOB1-203ENST00000509385 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms