RNA–Protein interactions for RNA: ENST00000509339.1

MXD3-207, Transcript of MAX dimerization protein 3, humanhuman

TSL 3

Gene MXD3, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MXD3-207ENST00000509339 NISCHQ9Y2I1 1504 aa59.27■■■■■ 7.08
MXD3-207ENST00000509339 CCDC180Q9P1Z9 1646 aa52.66■■■■■ 6.02
MXD3-207ENST00000509339 ABCC9O60706 1549 aa51.61■■■■■ 5.85
MXD3-207ENST00000509339 RB1CC1Q8TDY2 1594 aa49.6■■■■■ 5.53
MXD3-207ENST00000509339 DCAF8L2P0C7V8 631 aa49.59■■■■■ 5.53
MXD3-207ENST00000509339 NACADO15069 1562 aa49.53■■■■■ 5.52
MXD3-207ENST00000509339 ZCCHC6Q5VYS8 1495 aaKnown RBP49.37■■■■■ 5.49
MXD3-207ENST00000509339 MYO15BQ96JP2 1530 aa49.21■■■■■ 5.47
MXD3-207ENST00000509339 DCAF1Q9Y4B6 1507 aa49.01■■■■■ 5.44
MXD3-207ENST00000509339 UNC13AQ9UPW8 1703 aa48.45■■■■■ 5.35
MXD3-207ENST00000509339 PABPN1Q86U42 306 aaKnown RBP eCLIP48.24■■■■■ 5.315e-7■■□□□ 13.9
MXD3-207ENST00000509339 SCRIBQ14160 1630 aa48.1■■■■■ 5.29
MXD3-207ENST00000509339 BICRAQ9NZM4 1560 aa48.1■■■■■ 5.29
MXD3-207ENST00000509339 SHROOM4Q9ULL8 1493 aa47.57■■■■■ 5.21
MXD3-207ENST00000509339 DNAJC5BQ9UF47 199 aa47.37■■■■■ 5.17
MXD3-207ENST00000509339 EIF4G1Q04637 1599 aaKnown RBP46.83■■■■■ 5.09
MXD3-207ENST00000509339 CC2D2AQ9P2K1 1620 aa46.65■■■■■ 5.06
MXD3-207ENST00000509339 CECR2Q9BXF3 1484 aa46.36■■■■■ 5.01
MXD3-207ENST00000509339 SMARCA4P51532 1647 aa45.99■■■■■ 4.95
MXD3-207ENST00000509339 BAZ1AQ9NRL2 1556 aaPredicted RBP45.94■■■■■ 4.94
MXD3-207ENST00000509339 ATAD2BQ9ULI0 1458 aa45.74■■■■■ 4.91
MXD3-207ENST00000509339 NCAPD3P42695 1498 aa45.71■■■■■ 4.91
MXD3-207ENST00000509339 MROH2BQ7Z745 1585 aa45.7■■■■■ 4.91
MXD3-207ENST00000509339 SMARCA2P51531 1590 aa45.69■■■■■ 4.9
MXD3-207ENST00000509339 PEG3Q9GZU2 1588 aa45.5■■■■■ 4.87
MXD3-207ENST00000509339 HMGXB3Q12766 1538 aa45.48■■■■■ 4.87
MXD3-207ENST00000509339 BAZ1BQ9UIG0 1483 aaKnown RBP45.38■■■■■ 4.86
MXD3-207ENST00000509339 WIZO95785 1651 aa45.19■■■■■ 4.83
MXD3-207ENST00000509339 RSF1Q96T23 1441 aaPredicted RBP45.18■■■■■ 4.82
MXD3-207ENST00000509339 TOP2AP11388 1531 aaKnown RBP44.71■■■■■ 4.75
MXD3-207ENST00000509339 NESP48681 1621 aa44.65■■■■■ 4.74
MXD3-207ENST00000509339 LAMC3Q9Y6N6 1575 aa44.5■■■■■ 4.71
MXD3-207ENST00000509339 ERCC6Q03468 1493 aa44.48■■■■■ 4.71
MXD3-207ENST00000509339 CADPSQ9ULU8 1353 aa44.4■■■■■ 4.7
MXD3-207ENST00000509339 PDS5BQ9NTI5 1447 aa44.23■■■■■ 4.67
MXD3-207ENST00000509339 CCDC88BA6NC98 1476 aa44.2■■■■■ 4.67
MXD3-207ENST00000509339 CFTRP13569 1480 aa44.12■■■■■ 4.65
MXD3-207ENST00000509339 KIF21AQ7Z4S6 1674 aa44.1■■■■■ 4.65
MXD3-207ENST00000509339 SUPT5HO00267 1087 aaKnown RBP44.08■■■■■ 4.65
MXD3-207ENST00000509339 CUX2O14529 1486 aa43.98■■■■■ 4.63
MXD3-207ENST00000509339 THOC2Q8NI27 1593 aaKnown RBP43.94■■■■■ 4.62
MXD3-207ENST00000509339 FANCD2Q9BXW9 1451 aa43.89■■■■■ 4.62
MXD3-207ENST00000509339 CEP164Q9UPV0 1460 aa43.84■■■■■ 4.61
MXD3-207ENST00000509339 MRC2Q9UBG0 1479 aa43.78■■■■■ 4.6
MXD3-207ENST00000509339 PRDM2Q13029 1718 aa43.75■■■■■ 4.59
MXD3-207ENST00000509339 WDR62O43379 1518 aa43.61■■■■■ 4.57
MXD3-207ENST00000509339 URB2Q14146 1524 aaKnown RBP43.46■■■■■ 4.55
MXD3-207ENST00000509339 TOPBP1Q92547 1522 aa43.19■■■■■ 4.5
MXD3-207ENST00000509339 ABCC8Q09428 1581 aa43.16■■■■■ 4.5
MXD3-207ENST00000509339 DNMBPQ6XZF7 1577 aa43.13■■■■■ 4.5
MXD3-207ENST00000509339 IFT140Q96RY7 1462 aa42.92■■■■■ 4.46
MXD3-207ENST00000509339 CUX1P39880 1505 aa42.87■■■■■ 4.45
MXD3-207ENST00000509339 POLA1P09884 1462 aaPredicted RBP42.82■■■■■ 4.45
MXD3-207ENST00000509339 ZNF608Q9ULD9 1512 aaPredicted RBP42.74■■■■■ 4.43
MXD3-207ENST00000509339 FGD5Q6ZNL6 1462 aa42.73■■■■■ 4.43
MXD3-207ENST00000509339 TARBP1Q13395 1621 aaKnown RBP42.7■■■■■ 4.43
MXD3-207ENST00000509339 SOGA1O94964 1423 aa42.66■■■■■ 4.42
MXD3-207ENST00000509339 DNAJC5Q9H3Z4 198 aa42.66■■■■■ 4.42
MXD3-207ENST00000509339 RAD54L2Q9Y4B4 1467 aa42.66■■■■■ 4.42
MXD3-207ENST00000509339 WRNQ14191 1432 aaPredicted RBP eCLIP42.6■■■■■ 4.41
MXD3-207ENST00000509339 EIF4G3O43432 1585 aaKnown RBP42.55■■■■■ 4.4
MXD3-207ENST00000509339 AQRO60306 1485 aaKnown RBP eCLIP42.5■■■■■ 4.39
MXD3-207ENST00000509339 TOP2BQ02880 1626 aa42.48■■■■■ 4.39
MXD3-207ENST00000509339 SYNJ1O43426 1573 aa42.48■■■■■ 4.39
MXD3-207ENST00000509339 BIVM-ERCC5R4GMW8 1640 aa42.46■■■■■ 4.39
MXD3-207ENST00000509339 TDRD9Q8NDG6 1382 aaKnown RBP42.44■■■■■ 4.38
MXD3-207ENST00000509339 WDR97A6NE52 1622 aa42.34■■■■■ 4.37
MXD3-207ENST00000509339 ABCA10Q8WWZ4 1543 aa42.3■■■■■ 4.36
MXD3-207ENST00000509339 OSCARQ8IYS5 282 aa42.19■■■■■ 4.34
MXD3-207ENST00000509339 GRIN2BQ13224 1484 aa42.16■■■■■ 4.34
MXD3-207ENST00000509339 GAPVD1Q14C86 1478 aa42.16■■■■■ 4.34
MXD3-207ENST00000509339 ABCA5Q8WWZ7 1642 aa42.12■■■■■ 4.33
MXD3-207ENST00000509339 SNAPC4Q5SXM2 1469 aa42.11■■■■■ 4.33
MXD3-207ENST00000509339 PBRM1Q86U86 1689 aa42.05■■■■■ 4.32
MXD3-207ENST00000509339 MAGI1Q96QZ7 1491 aaPredicted RBP42.04■■■■■ 4.32
MXD3-207ENST00000509339 FBLN2P98095 1184 aa42.03■■■■■ 4.32
MXD3-207ENST00000509339 CHD1O14646 1710 aa42.01■■■■■ 4.32
MXD3-207ENST00000509339 CHMP7Q8WUX9 453 aaPredicted RBP41.9■■■■■ 4.3
MXD3-207ENST00000509339 SYNJ2O15056 1496 aa41.87■■■■■ 4.29
MXD3-207ENST00000509339 ERICH3Q5RHP9 1530 aa41.78■■■■■ 4.28
MXD3-207ENST00000509339 ADAMTS12P58397 1594 aa41.73■■■■■ 4.27
MXD3-207ENST00000509339 KIF27Q86VH2 1401 aa41.71■■■■■ 4.27
MXD3-207ENST00000509339 FHAD1B1AJZ9 1412 aa41.68■■■■■ 4.26
MXD3-207ENST00000509339 GRIN2AQ12879 1464 aa41.6■■■■■ 4.25
MXD3-207ENST00000509339 TRIM41Q8WV44 630 aa41.6■■■■■ 4.25
MXD3-207ENST00000509339 CLASP1Q7Z460 1538 aa41.55■■■■■ 4.24
MXD3-207ENST00000509339 IGF1RP08069 1367 aa41.53■■■■■ 4.24
MXD3-207ENST00000509339 ARHGEF11O15085 1522 aa41.49■■■■■ 4.23
MXD3-207ENST00000509339 RIMBP3CA6NJZ7 1639 aa41.49■■■■■ 4.23
MXD3-207ENST00000509339 RIMBP3BA6NNM3 1639 aa41.49■■■■■ 4.23
MXD3-207ENST00000509339 RIMBP3Q9UFD9 1639 aa41.49■■■■■ 4.23
MXD3-207ENST00000509339 NUP160Q12769 1436 aa41.42■■■■■ 4.22
MXD3-207ENST00000509339 CUL7Q14999 1698 aa41.4■■■■■ 4.22
MXD3-207ENST00000509339 CEP170Q5SW79 1584 aa41.4■■■■■ 4.22
MXD3-207ENST00000509339 RUSC2Q8N2Y8 1516 aa41.34■■■■■ 4.21
MXD3-207ENST00000509339 CARMIL1Q5VZK9 1371 aa41.3■■■■■ 4.2
MXD3-207ENST00000509339 ARAP1Q96P48 1450 aa41.17■■■■■ 4.18
MXD3-207ENST00000509339 CYB5RLQ6IPT4 315 aa41.14■■■■■ 4.18
MXD3-207ENST00000509339 CHIC1Q5VXU3 224 aa41.11■■■■■ 4.17
MXD3-207ENST00000509339 SHROOM2Q13796 1616 aa41.08■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms