RNA–Protein interactions for RNA: ENST00000508879.5

LINC02200-202, Transcript of long intergenic non-protein coding RNA 2200, humanhuman

TSL 3 BASIC

Gene LINC02200, Length 615 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02200-202ENST00000508879 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
LINC02200-202ENST00000508879 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
LINC02200-202ENST00000508879 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
LINC02200-202ENST00000508879 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
LINC02200-202ENST00000508879 FOXD1Q16676 465 aa16.7■□□□□ 0.26
LINC02200-202ENST00000508879 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
LINC02200-202ENST00000508879 MSH5O43196 834 aa15.81■□□□□ 0.12
LINC02200-202ENST00000508879 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
LINC02200-202ENST00000508879 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
LINC02200-202ENST00000508879 ADRA2BP18089 450 aa15.13■□□□□ 0.01
LINC02200-202ENST00000508879 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
LINC02200-202ENST00000508879 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
LINC02200-202ENST00000508879 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
LINC02200-202ENST00000508879 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
LINC02200-202ENST00000508879 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
LINC02200-202ENST00000508879 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
LINC02200-202ENST00000508879 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
LINC02200-202ENST00000508879 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
LINC02200-202ENST00000508879 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
LINC02200-202ENST00000508879 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
LINC02200-202ENST00000508879 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
LINC02200-202ENST00000508879 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
LINC02200-202ENST00000508879 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
LINC02200-202ENST00000508879 ABCC9O60706 1549 aa13.04□□□□□ -0.32
LINC02200-202ENST00000508879 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
LINC02200-202ENST00000508879 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
LINC02200-202ENST00000508879 POTEHQ6S545 545 aa12.71□□□□□ -0.37
LINC02200-202ENST00000508879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC02200-202ENST00000508879 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
LINC02200-202ENST00000508879 DSG3P32926 999 aa12.43□□□□□ -0.42
LINC02200-202ENST00000508879 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
LINC02200-202ENST00000508879 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
LINC02200-202ENST00000508879 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
LINC02200-202ENST00000508879 CAPN15O75808 1086 aa12.35□□□□□ -0.43
LINC02200-202ENST00000508879 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC02200-202ENST00000508879 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
LINC02200-202ENST00000508879 ABCB7O75027 752 aa12.02□□□□□ -0.49
LINC02200-202ENST00000508879 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
LINC02200-202ENST00000508879 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
LINC02200-202ENST00000508879 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
LINC02200-202ENST00000508879 APLP2Q06481 763 aa11.94□□□□□ -0.5
LINC02200-202ENST00000508879 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
LINC02200-202ENST00000508879 CECR2Q9BXF3 1484 aa11.81□□□□□ -0.52
LINC02200-202ENST00000508879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
LINC02200-202ENST00000508879 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
LINC02200-202ENST00000508879 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
LINC02200-202ENST00000508879 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
LINC02200-202ENST00000508879 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
LINC02200-202ENST00000508879 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
LINC02200-202ENST00000508879 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
LINC02200-202ENST00000508879 KCNA4P22459 653 aa11.64□□□□□ -0.55
LINC02200-202ENST00000508879 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
LINC02200-202ENST00000508879 POLA2Q14181 598 aa11.58□□□□□ -0.56
LINC02200-202ENST00000508879 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
LINC02200-202ENST00000508879 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
LINC02200-202ENST00000508879 CUX2O14529 1486 aa11.51□□□□□ -0.57
LINC02200-202ENST00000508879 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
LINC02200-202ENST00000508879 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
LINC02200-202ENST00000508879 NACADO15069 1562 aa11.43□□□□□ -0.58
LINC02200-202ENST00000508879 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
LINC02200-202ENST00000508879 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
LINC02200-202ENST00000508879 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
LINC02200-202ENST00000508879 HAX1O00165 279 aa11.34□□□□□ -0.59
LINC02200-202ENST00000508879 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
LINC02200-202ENST00000508879 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
LINC02200-202ENST00000508879 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC02200-202ENST00000508879 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
LINC02200-202ENST00000508879 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
LINC02200-202ENST00000508879 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
LINC02200-202ENST00000508879 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
LINC02200-202ENST00000508879 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
LINC02200-202ENST00000508879 EVX2Q03828 476 aa11.2□□□□□ -0.62
LINC02200-202ENST00000508879 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
LINC02200-202ENST00000508879 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
LINC02200-202ENST00000508879 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
LINC02200-202ENST00000508879 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
LINC02200-202ENST00000508879 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
LINC02200-202ENST00000508879 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
LINC02200-202ENST00000508879 LHX8Q68G74 356 aa10.93□□□□□ -0.66
LINC02200-202ENST00000508879 NESP48681 1621 aa10.92□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 GABBR2O75899 941 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
LINC02200-202ENST00000508879 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
LINC02200-202ENST00000508879 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
LINC02200-202ENST00000508879 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
LINC02200-202ENST00000508879 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
LINC02200-202ENST00000508879 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
LINC02200-202ENST00000508879 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
LINC02200-202ENST00000508879 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
LINC02200-202ENST00000508879 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
LINC02200-202ENST00000508879 FBLN2P98095 1184 aa10.78□□□□□ -0.68
LINC02200-202ENST00000508879 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
LINC02200-202ENST00000508879 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.69
LINC02200-202ENST00000508879 ATXN8OSP0DMR3 200 aa10.73□□□□□ -0.69
LINC02200-202ENST00000508879 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
LINC02200-202ENST00000508879 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms