RNA–Protein interactions for RNA: ENST00000508863.6

MRPS27-204, Transcript of mitochondrial ribosomal protein S27, humanhuman

TSL 3

Gene MRPS27, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS27-204ENST00000508863 NISCHQ9Y2I1 1504 aa32.54■■■□□ 2.8
MRPS27-204ENST00000508863 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
MRPS27-204ENST00000508863 ABCC9O60706 1549 aa28.71■■■□□ 2.19
MRPS27-204ENST00000508863 RB1CC1Q8TDY2 1594 aa27.44■■□□□ 1.98
MRPS27-204ENST00000508863 NACADO15069 1562 aa27.35■■□□□ 1.97
MRPS27-204ENST00000508863 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
MRPS27-204ENST00000508863 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
MRPS27-204ENST00000508863 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
MRPS27-204ENST00000508863 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
MRPS27-204ENST00000508863 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
MRPS27-204ENST00000508863 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
MRPS27-204ENST00000508863 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
MRPS27-204ENST00000508863 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
MRPS27-204ENST00000508863 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
MRPS27-204ENST00000508863 SHROOM4Q9ULL8 1493 aa26.35■■□□□ 1.81
MRPS27-204ENST00000508863 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
MRPS27-204ENST00000508863 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
MRPS27-204ENST00000508863 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
MRPS27-204ENST00000508863 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
MRPS27-204ENST00000508863 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
MRPS27-204ENST00000508863 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
MRPS27-204ENST00000508863 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
MRPS27-204ENST00000508863 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
MRPS27-204ENST00000508863 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
MRPS27-204ENST00000508863 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
MRPS27-204ENST00000508863 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
MRPS27-204ENST00000508863 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
MRPS27-204ENST00000508863 NESP48681 1621 aa24.77■■□□□ 1.56
MRPS27-204ENST00000508863 WIZO95785 1651 aa24.77■■□□□ 1.56
MRPS27-204ENST00000508863 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
MRPS27-204ENST00000508863 RSF1Q96T23 1441 aaPredicted RBP24.7■■□□□ 1.55
MRPS27-204ENST00000508863 LAMC3Q9Y6N6 1575 aa24.62■■□□□ 1.53
MRPS27-204ENST00000508863 CUX2O14529 1486 aa24.58■■□□□ 1.53
MRPS27-204ENST00000508863 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
MRPS27-204ENST00000508863 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
MRPS27-204ENST00000508863 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
MRPS27-204ENST00000508863 THOC2Q8NI27 1593 aaKnown RBP24.45■■□□□ 1.5
MRPS27-204ENST00000508863 KIF21AQ7Z4S6 1674 aa24.41■■□□□ 1.5
MRPS27-204ENST00000508863 CFTRP13569 1480 aa24.32■■□□□ 1.48
MRPS27-204ENST00000508863 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
MRPS27-204ENST00000508863 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
MRPS27-204ENST00000508863 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
MRPS27-204ENST00000508863 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
MRPS27-204ENST00000508863 WDR62O43379 1518 aa24.2■■□□□ 1.46
MRPS27-204ENST00000508863 DNAJC5Q9H3Z4 198 aa24.14■■□□□ 1.45
MRPS27-204ENST00000508863 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
MRPS27-204ENST00000508863 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
MRPS27-204ENST00000508863 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
MRPS27-204ENST00000508863 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
MRPS27-204ENST00000508863 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
MRPS27-204ENST00000508863 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
MRPS27-204ENST00000508863 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
MRPS27-204ENST00000508863 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
MRPS27-204ENST00000508863 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
MRPS27-204ENST00000508863 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
MRPS27-204ENST00000508863 CUX1P39880 1505 aa23.56■■□□□ 1.36
MRPS27-204ENST00000508863 EIF4G3O43432 1585 aaKnown RBP23.56■■□□□ 1.36
MRPS27-204ENST00000508863 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
MRPS27-204ENST00000508863 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
MRPS27-204ENST00000508863 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.352e-13■■■■■ 34.2
MRPS27-204ENST00000508863 SOGA1O94964 1423 aa23.49■■□□□ 1.35
MRPS27-204ENST00000508863 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
MRPS27-204ENST00000508863 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
MRPS27-204ENST00000508863 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
MRPS27-204ENST00000508863 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
MRPS27-204ENST00000508863 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
MRPS27-204ENST00000508863 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
MRPS27-204ENST00000508863 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
MRPS27-204ENST00000508863 CHD1O14646 1710 aa23.26■■□□□ 1.31
MRPS27-204ENST00000508863 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
MRPS27-204ENST00000508863 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
MRPS27-204ENST00000508863 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
MRPS27-204ENST00000508863 FBLN2P98095 1184 aa23.23■■□□□ 1.31
MRPS27-204ENST00000508863 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
MRPS27-204ENST00000508863 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
MRPS27-204ENST00000508863 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
MRPS27-204ENST00000508863 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
MRPS27-204ENST00000508863 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
MRPS27-204ENST00000508863 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
MRPS27-204ENST00000508863 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
MRPS27-204ENST00000508863 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
MRPS27-204ENST00000508863 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
MRPS27-204ENST00000508863 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
MRPS27-204ENST00000508863 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
MRPS27-204ENST00000508863 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
MRPS27-204ENST00000508863 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
MRPS27-204ENST00000508863 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
MRPS27-204ENST00000508863 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
MRPS27-204ENST00000508863 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
MRPS27-204ENST00000508863 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
MRPS27-204ENST00000508863 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
MRPS27-204ENST00000508863 NUP160Q12769 1436 aa22.89■■□□□ 1.25
MRPS27-204ENST00000508863 CEP170Q5SW79 1584 aa22.87■■□□□ 1.25
MRPS27-204ENST00000508863 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
MRPS27-204ENST00000508863 IGF1RP08069 1367 aa22.76■■□□□ 1.23
MRPS27-204ENST00000508863 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
MRPS27-204ENST00000508863 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
MRPS27-204ENST00000508863 CUL7Q14999 1698 aa22.68■■□□□ 1.22
MRPS27-204ENST00000508863 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
MRPS27-204ENST00000508863 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 672.1 ms