RNA–Protein interactions for RNA: ENST00000508748.5

PGM3-208, Transcript of phosphoglucomutase 3, humanhuman

TSL 5

Gene PGM3, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-208ENST00000508748 NISCHQ9Y2I1 1504 aa29.93■■■□□ 2.38
PGM3-208ENST00000508748 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
PGM3-208ENST00000508748 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PGM3-208ENST00000508748 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
PGM3-208ENST00000508748 NACADO15069 1562 aa25.31■■□□□ 1.64
PGM3-208ENST00000508748 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PGM3-208ENST00000508748 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
PGM3-208ENST00000508748 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
PGM3-208ENST00000508748 ZCCHC6Q5VYS8 1495 aaKnown RBP24.84■■□□□ 1.57
PGM3-208ENST00000508748 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
PGM3-208ENST00000508748 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PGM3-208ENST00000508748 DNAJC5BQ9UF47 199 aa24.68■■□□□ 1.54
PGM3-208ENST00000508748 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
PGM3-208ENST00000508748 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
PGM3-208ENST00000508748 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
PGM3-208ENST00000508748 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
PGM3-208ENST00000508748 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
PGM3-208ENST00000508748 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
PGM3-208ENST00000508748 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
PGM3-208ENST00000508748 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
PGM3-208ENST00000508748 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
PGM3-208ENST00000508748 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
PGM3-208ENST00000508748 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
PGM3-208ENST00000508748 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
PGM3-208ENST00000508748 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
PGM3-208ENST00000508748 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
PGM3-208ENST00000508748 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
PGM3-208ENST00000508748 ERCC6Q03468 1493 aa23■■□□□ 1.27
PGM3-208ENST00000508748 NESP48681 1621 aa22.89■■□□□ 1.25
PGM3-208ENST00000508748 WIZO95785 1651 aa22.87■■□□□ 1.25
PGM3-208ENST00000508748 CUX2O14529 1486 aa22.85■■□□□ 1.25
PGM3-208ENST00000508748 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
PGM3-208ENST00000508748 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
PGM3-208ENST00000508748 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
PGM3-208ENST00000508748 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
PGM3-208ENST00000508748 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
PGM3-208ENST00000508748 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
PGM3-208ENST00000508748 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
PGM3-208ENST00000508748 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
PGM3-208ENST00000508748 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
PGM3-208ENST00000508748 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
PGM3-208ENST00000508748 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
PGM3-208ENST00000508748 CFTRP13569 1480 aa22.39■■□□□ 1.17
PGM3-208ENST00000508748 WDR62O43379 1518 aa22.38■■□□□ 1.17
PGM3-208ENST00000508748 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
PGM3-208ENST00000508748 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
PGM3-208ENST00000508748 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
PGM3-208ENST00000508748 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
PGM3-208ENST00000508748 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
PGM3-208ENST00000508748 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.11
PGM3-208ENST00000508748 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
PGM3-208ENST00000508748 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
PGM3-208ENST00000508748 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
PGM3-208ENST00000508748 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
PGM3-208ENST00000508748 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
PGM3-208ENST00000508748 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
PGM3-208ENST00000508748 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
PGM3-208ENST00000508748 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
PGM3-208ENST00000508748 CHD1O14646 1710 aa21.7■■□□□ 1.06
PGM3-208ENST00000508748 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.069e-6■□□□□ 10.2
PGM3-208ENST00000508748 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
PGM3-208ENST00000508748 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
PGM3-208ENST00000508748 CUX1P39880 1505 aa21.65■■□□□ 1.06
PGM3-208ENST00000508748 SOGA1O94964 1423 aa21.65■■□□□ 1.06
PGM3-208ENST00000508748 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
PGM3-208ENST00000508748 RIMBP3CA6NJZ7 1639 aa21.59■■□□□ 1.05
PGM3-208ENST00000508748 RIMBP3BA6NNM3 1639 aa21.59■■□□□ 1.05
PGM3-208ENST00000508748 RIMBP3Q9UFD9 1639 aa21.59■■□□□ 1.05
PGM3-208ENST00000508748 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
PGM3-208ENST00000508748 FBLN2P98095 1184 aa21.54■■□□□ 1.04
PGM3-208ENST00000508748 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
PGM3-208ENST00000508748 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
PGM3-208ENST00000508748 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
PGM3-208ENST00000508748 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
PGM3-208ENST00000508748 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.03
PGM3-208ENST00000508748 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
PGM3-208ENST00000508748 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
PGM3-208ENST00000508748 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
PGM3-208ENST00000508748 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
PGM3-208ENST00000508748 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
PGM3-208ENST00000508748 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
PGM3-208ENST00000508748 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
PGM3-208ENST00000508748 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
PGM3-208ENST00000508748 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
PGM3-208ENST00000508748 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
PGM3-208ENST00000508748 CYB5RLQ6IPT4 315 aa21.3■■□□□ 1
PGM3-208ENST00000508748 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
PGM3-208ENST00000508748 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
PGM3-208ENST00000508748 GRIN2AQ12879 1464 aa21.19■□□□□ 0.98
PGM3-208ENST00000508748 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
PGM3-208ENST00000508748 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
PGM3-208ENST00000508748 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
PGM3-208ENST00000508748 NUP160Q12769 1436 aa21.07■□□□□ 0.96
PGM3-208ENST00000508748 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
PGM3-208ENST00000508748 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
PGM3-208ENST00000508748 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
PGM3-208ENST00000508748 CUL7Q14999 1698 aa20.98■□□□□ 0.95
PGM3-208ENST00000508748 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
PGM3-208ENST00000508748 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
PGM3-208ENST00000508748 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms