RNA–Protein interactions for RNA: ENST00000508681.5

SNCAIP-210, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-210ENST00000508681 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
SNCAIP-210ENST00000508681 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
SNCAIP-210ENST00000508681 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
SNCAIP-210ENST00000508681 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
SNCAIP-210ENST00000508681 ABCC9O60706 1549 aa23.93■■□□□ 1.42
SNCAIP-210ENST00000508681 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
SNCAIP-210ENST00000508681 NACADO15069 1562 aa23.68■■□□□ 1.38
SNCAIP-210ENST00000508681 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
SNCAIP-210ENST00000508681 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
SNCAIP-210ENST00000508681 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
SNCAIP-210ENST00000508681 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
SNCAIP-210ENST00000508681 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
SNCAIP-210ENST00000508681 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
SNCAIP-210ENST00000508681 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNCAIP-210ENST00000508681 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.17
SNCAIP-210ENST00000508681 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
SNCAIP-210ENST00000508681 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
SNCAIP-210ENST00000508681 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
SNCAIP-210ENST00000508681 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
SNCAIP-210ENST00000508681 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
SNCAIP-210ENST00000508681 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
SNCAIP-210ENST00000508681 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
SNCAIP-210ENST00000508681 WIZO95785 1651 aa22.01■■□□□ 1.11
SNCAIP-210ENST00000508681 SMARCA2P51531 1590 aa21.95■■□□□ 1.11
SNCAIP-210ENST00000508681 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
SNCAIP-210ENST00000508681 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
SNCAIP-210ENST00000508681 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
SNCAIP-210ENST00000508681 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
SNCAIP-210ENST00000508681 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
SNCAIP-210ENST00000508681 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
SNCAIP-210ENST00000508681 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
SNCAIP-210ENST00000508681 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
SNCAIP-210ENST00000508681 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
SNCAIP-210ENST00000508681 CFTRP13569 1480 aa21.25■□□□□ 0.99
SNCAIP-210ENST00000508681 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
SNCAIP-210ENST00000508681 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
SNCAIP-210ENST00000508681 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
SNCAIP-210ENST00000508681 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
SNCAIP-210ENST00000508681 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
SNCAIP-210ENST00000508681 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
SNCAIP-210ENST00000508681 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
SNCAIP-210ENST00000508681 NESP48681 1621 aa20.93■□□□□ 0.94
SNCAIP-210ENST00000508681 PDS5BQ9NTI5 1447 aa20.93■□□□□ 0.94
SNCAIP-210ENST00000508681 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
SNCAIP-210ENST00000508681 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
SNCAIP-210ENST00000508681 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
SNCAIP-210ENST00000508681 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
SNCAIP-210ENST00000508681 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
SNCAIP-210ENST00000508681 CUX1P39880 1505 aa20.8■□□□□ 0.92
SNCAIP-210ENST00000508681 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
SNCAIP-210ENST00000508681 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
SNCAIP-210ENST00000508681 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SNCAIP-210ENST00000508681 EEA1Q15075 1411 aa20.67■□□□□ 0.9
SNCAIP-210ENST00000508681 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
SNCAIP-210ENST00000508681 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
SNCAIP-210ENST00000508681 FGD5Q6ZNL6 1462 aa20.6■□□□□ 0.89
SNCAIP-210ENST00000508681 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
SNCAIP-210ENST00000508681 WDR62O43379 1518 aa20.58■□□□□ 0.88
SNCAIP-210ENST00000508681 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
SNCAIP-210ENST00000508681 SOGA1O94964 1423 aa20.53■□□□□ 0.88
SNCAIP-210ENST00000508681 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
SNCAIP-210ENST00000508681 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
SNCAIP-210ENST00000508681 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
SNCAIP-210ENST00000508681 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
SNCAIP-210ENST00000508681 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
SNCAIP-210ENST00000508681 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
SNCAIP-210ENST00000508681 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
SNCAIP-210ENST00000508681 CUX2O14529 1486 aa20.41■□□□□ 0.86
SNCAIP-210ENST00000508681 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
SNCAIP-210ENST00000508681 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
SNCAIP-210ENST00000508681 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
SNCAIP-210ENST00000508681 KIF21BO75037 1637 aa20.36■□□□□ 0.85
SNCAIP-210ENST00000508681 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
SNCAIP-210ENST00000508681 IGF1RP08069 1367 aa20.31■□□□□ 0.84
SNCAIP-210ENST00000508681 PRXQ9BXM0 1461 aa20.3■□□□□ 0.84
SNCAIP-210ENST00000508681 ERICH3Q5RHP9 1530 aa20.28■□□□□ 0.84
SNCAIP-210ENST00000508681 GOLGA3Q08378 1498 aa20.27■□□□□ 0.84
SNCAIP-210ENST00000508681 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
SNCAIP-210ENST00000508681 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
SNCAIP-210ENST00000508681 CUL7Q14999 1698 aa20.24■□□□□ 0.83
SNCAIP-210ENST00000508681 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
SNCAIP-210ENST00000508681 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
SNCAIP-210ENST00000508681 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
SNCAIP-210ENST00000508681 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
SNCAIP-210ENST00000508681 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
SNCAIP-210ENST00000508681 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
SNCAIP-210ENST00000508681 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
SNCAIP-210ENST00000508681 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
SNCAIP-210ENST00000508681 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNCAIP-210ENST00000508681 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
SNCAIP-210ENST00000508681 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
SNCAIP-210ENST00000508681 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
SNCAIP-210ENST00000508681 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
SNCAIP-210ENST00000508681 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
SNCAIP-210ENST00000508681 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
SNCAIP-210ENST00000508681 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
SNCAIP-210ENST00000508681 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
SNCAIP-210ENST00000508681 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
SNCAIP-210ENST00000508681 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
SNCAIP-210ENST00000508681 CLIP1P30622 1438 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms