RNA–Protein interactions for RNA: ENST00000508184.5

ZFYVE28-205, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 4

Gene ZFYVE28, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-205ENST00000508184 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
ZFYVE28-205ENST00000508184 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
ZFYVE28-205ENST00000508184 ABCC9O60706 1549 aa34.5■■■■□ 3.11
ZFYVE28-205ENST00000508184 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
ZFYVE28-205ENST00000508184 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
ZFYVE28-205ENST00000508184 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
ZFYVE28-205ENST00000508184 NACADO15069 1562 aa33.44■■■□□ 2.94
ZFYVE28-205ENST00000508184 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
ZFYVE28-205ENST00000508184 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.92
ZFYVE28-205ENST00000508184 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
ZFYVE28-205ENST00000508184 SCRIBQ14160 1630 aa32.74■■■□□ 2.83
ZFYVE28-205ENST00000508184 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
ZFYVE28-205ENST00000508184 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
ZFYVE28-205ENST00000508184 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
ZFYVE28-205ENST00000508184 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
ZFYVE28-205ENST00000508184 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
ZFYVE28-205ENST00000508184 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
ZFYVE28-205ENST00000508184 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.62
ZFYVE28-205ENST00000508184 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
ZFYVE28-205ENST00000508184 SMARCA4P51532 1647 aa31.3■■■□□ 2.6
ZFYVE28-205ENST00000508184 RSF1Q96T23 1441 aaPredicted RBP31.27■■■□□ 2.6
ZFYVE28-205ENST00000508184 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
ZFYVE28-205ENST00000508184 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
ZFYVE28-205ENST00000508184 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
ZFYVE28-205ENST00000508184 SMARCA2P51531 1590 aa30.99■■■□□ 2.55
ZFYVE28-205ENST00000508184 WIZO95785 1651 aa30.97■■■□□ 2.55
ZFYVE28-205ENST00000508184 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
ZFYVE28-205ENST00000508184 NCAPD3P42695 1498 aa30.91■■■□□ 2.54
ZFYVE28-205ENST00000508184 BAZ1BQ9UIG0 1483 aaKnown RBP30.85■■■□□ 2.53
ZFYVE28-205ENST00000508184 HMGXB3Q12766 1538 aa30.73■■■□□ 2.51
ZFYVE28-205ENST00000508184 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
ZFYVE28-205ENST00000508184 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
ZFYVE28-205ENST00000508184 CADPSQ9ULU8 1353 aa30.13■■■□□ 2.41
ZFYVE28-205ENST00000508184 CFTRP13569 1480 aa30.02■■■□□ 2.4
ZFYVE28-205ENST00000508184 NESP48681 1621 aa30.02■■■□□ 2.4
ZFYVE28-205ENST00000508184 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
ZFYVE28-205ENST00000508184 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
ZFYVE28-205ENST00000508184 FANCD2Q9BXW9 1451 aa29.75■■■□□ 2.35
ZFYVE28-205ENST00000508184 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
ZFYVE28-205ENST00000508184 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
ZFYVE28-205ENST00000508184 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
ZFYVE28-205ENST00000508184 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
ZFYVE28-205ENST00000508184 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
ZFYVE28-205ENST00000508184 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
ZFYVE28-205ENST00000508184 MRC2Q9UBG0 1479 aa29.44■■■□□ 2.3
ZFYVE28-205ENST00000508184 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
ZFYVE28-205ENST00000508184 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
ZFYVE28-205ENST00000508184 URB2Q14146 1524 aaKnown RBP29.38■■■□□ 2.29
ZFYVE28-205ENST00000508184 CUX1P39880 1505 aa29.35■■■□□ 2.29
ZFYVE28-205ENST00000508184 TOPBP1Q92547 1522 aa29.32■■■□□ 2.28
ZFYVE28-205ENST00000508184 DNMBPQ6XZF7 1577 aa29.28■■■□□ 2.28
ZFYVE28-205ENST00000508184 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
ZFYVE28-205ENST00000508184 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
ZFYVE28-205ENST00000508184 WDR62O43379 1518 aa29.25■■■□□ 2.27
ZFYVE28-205ENST00000508184 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
ZFYVE28-205ENST00000508184 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
ZFYVE28-205ENST00000508184 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
ZFYVE28-205ENST00000508184 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
ZFYVE28-205ENST00000508184 SOGA1O94964 1423 aa29.1■■■□□ 2.25
ZFYVE28-205ENST00000508184 RAD54L2Q9Y4B4 1467 aa29.06■■■□□ 2.24
ZFYVE28-205ENST00000508184 CUX2O14529 1486 aa29.03■■■□□ 2.24
ZFYVE28-205ENST00000508184 IFT140Q96RY7 1462 aa28.98■■■□□ 2.23
ZFYVE28-205ENST00000508184 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
ZFYVE28-205ENST00000508184 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
ZFYVE28-205ENST00000508184 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
ZFYVE28-205ENST00000508184 FAM9AQ8IZU1 332 aaPredicted RBP28.86■■■□□ 2.21
ZFYVE28-205ENST00000508184 TARBP1Q13395 1621 aaKnown RBP28.84■■■□□ 2.21
ZFYVE28-205ENST00000508184 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
ZFYVE28-205ENST00000508184 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
ZFYVE28-205ENST00000508184 AQRO60306 1485 aaKnown RBP eCLIP28.8■■■□□ 2.23e-8■□□□□ 9.7
ZFYVE28-205ENST00000508184 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
ZFYVE28-205ENST00000508184 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
ZFYVE28-205ENST00000508184 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
ZFYVE28-205ENST00000508184 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
ZFYVE28-205ENST00000508184 EEA1Q15075 1411 aa28.67■■■□□ 2.18
ZFYVE28-205ENST00000508184 IGF1RP08069 1367 aa28.64■■■□□ 2.18
ZFYVE28-205ENST00000508184 GRIN2BQ13224 1484 aa28.62■■■□□ 2.17
ZFYVE28-205ENST00000508184 EIF4G3O43432 1585 aaKnown RBP28.61■■■□□ 2.17
ZFYVE28-205ENST00000508184 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
ZFYVE28-205ENST00000508184 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
ZFYVE28-205ENST00000508184 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.15
ZFYVE28-205ENST00000508184 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
ZFYVE28-205ENST00000508184 SNAPC4Q5SXM2 1469 aa28.5■■■□□ 2.15
ZFYVE28-205ENST00000508184 FBLN2P98095 1184 aa28.47■■■□□ 2.15
ZFYVE28-205ENST00000508184 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
ZFYVE28-205ENST00000508184 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
ZFYVE28-205ENST00000508184 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
ZFYVE28-205ENST00000508184 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
ZFYVE28-205ENST00000508184 PRXQ9BXM0 1461 aa28.38■■■□□ 2.13
ZFYVE28-205ENST00000508184 RAPGEF2Q9Y4G8 1499 aa28.34■■■□□ 2.13
ZFYVE28-205ENST00000508184 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
ZFYVE28-205ENST00000508184 SYNJ2O15056 1496 aa28.33■■■□□ 2.13
ZFYVE28-205ENST00000508184 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
ZFYVE28-205ENST00000508184 CUL7Q14999 1698 aa28.32■■■□□ 2.12
ZFYVE28-205ENST00000508184 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
ZFYVE28-205ENST00000508184 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
ZFYVE28-205ENST00000508184 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
ZFYVE28-205ENST00000508184 KIF21BO75037 1637 aa28.21■■■□□ 2.11
ZFYVE28-205ENST00000508184 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
ZFYVE28-205ENST00000508184 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms