RNA–Protein interactions for RNA: ENST00000508044.1

RACK1-218, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-218ENST00000508044 NISCHQ9Y2I1 1504 aa26.36■■□□□ 1.81
RACK1-218ENST00000508044 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
RACK1-218ENST00000508044 ABCC9O60706 1549 aa23.43■■□□□ 1.34
RACK1-218ENST00000508044 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
RACK1-218ENST00000508044 NACADO15069 1562 aa22.24■■□□□ 1.15
RACK1-218ENST00000508044 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
RACK1-218ENST00000508044 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
RACK1-218ENST00000508044 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
RACK1-218ENST00000508044 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
RACK1-218ENST00000508044 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
RACK1-218ENST00000508044 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
RACK1-218ENST00000508044 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
RACK1-218ENST00000508044 DCAF1Q9Y4B6 1507 aa21.76■■□□□ 1.07
RACK1-218ENST00000508044 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
RACK1-218ENST00000508044 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
RACK1-218ENST00000508044 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
RACK1-218ENST00000508044 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
RACK1-218ENST00000508044 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
RACK1-218ENST00000508044 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
RACK1-218ENST00000508044 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
RACK1-218ENST00000508044 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
RACK1-218ENST00000508044 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
RACK1-218ENST00000508044 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
RACK1-218ENST00000508044 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
RACK1-218ENST00000508044 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
RACK1-218ENST00000508044 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
RACK1-218ENST00000508044 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
RACK1-218ENST00000508044 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
RACK1-218ENST00000508044 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
RACK1-218ENST00000508044 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
RACK1-218ENST00000508044 NESP48681 1621 aa20.19■□□□□ 0.82
RACK1-218ENST00000508044 WIZO95785 1651 aa20.14■□□□□ 0.81
RACK1-218ENST00000508044 CUX2O14529 1486 aa20.09■□□□□ 0.81
RACK1-218ENST00000508044 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
RACK1-218ENST00000508044 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
RACK1-218ENST00000508044 THOC2Q8NI27 1593 aaKnown RBP19.99■□□□□ 0.79
RACK1-218ENST00000508044 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
RACK1-218ENST00000508044 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
RACK1-218ENST00000508044 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
RACK1-218ENST00000508044 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
RACK1-218ENST00000508044 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
RACK1-218ENST00000508044 MRC2Q9UBG0 1479 aa19.74■□□□□ 0.75
RACK1-218ENST00000508044 CFTRP13569 1480 aa19.72■□□□□ 0.75
RACK1-218ENST00000508044 WDR62O43379 1518 aa19.71■□□□□ 0.75
RACK1-218ENST00000508044 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
RACK1-218ENST00000508044 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
RACK1-218ENST00000508044 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
RACK1-218ENST00000508044 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
RACK1-218ENST00000508044 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
RACK1-218ENST00000508044 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
RACK1-218ENST00000508044 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
RACK1-218ENST00000508044 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
RACK1-218ENST00000508044 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
RACK1-218ENST00000508044 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
RACK1-218ENST00000508044 ABCC8Q09428 1581 aa19.27■□□□□ 0.67
RACK1-218ENST00000508044 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
RACK1-218ENST00000508044 TARBP1Q13395 1621 aaKnown RBP19.2■□□□□ 0.66
RACK1-218ENST00000508044 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
RACK1-218ENST00000508044 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
RACK1-218ENST00000508044 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
RACK1-218ENST00000508044 CUX1P39880 1505 aa19.1■□□□□ 0.65
RACK1-218ENST00000508044 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.654e-13■■■■■ 48.4
RACK1-218ENST00000508044 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
RACK1-218ENST00000508044 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
RACK1-218ENST00000508044 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
RACK1-218ENST00000508044 CHD1O14646 1710 aa19.06■□□□□ 0.64
RACK1-218ENST00000508044 SOGA1O94964 1423 aa19.04■□□□□ 0.64
RACK1-218ENST00000508044 WDR97A6NE52 1622 aa19■□□□□ 0.63
RACK1-218ENST00000508044 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
RACK1-218ENST00000508044 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
RACK1-218ENST00000508044 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
RACK1-218ENST00000508044 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
RACK1-218ENST00000508044 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
RACK1-218ENST00000508044 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
RACK1-218ENST00000508044 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
RACK1-218ENST00000508044 FBLN2P98095 1184 aa18.9■□□□□ 0.62
RACK1-218ENST00000508044 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
RACK1-218ENST00000508044 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
RACK1-218ENST00000508044 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
RACK1-218ENST00000508044 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
RACK1-218ENST00000508044 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
RACK1-218ENST00000508044 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
RACK1-218ENST00000508044 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
RACK1-218ENST00000508044 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
RACK1-218ENST00000508044 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
RACK1-218ENST00000508044 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
RACK1-218ENST00000508044 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
RACK1-218ENST00000508044 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
RACK1-218ENST00000508044 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
RACK1-218ENST00000508044 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
RACK1-218ENST00000508044 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
RACK1-218ENST00000508044 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
RACK1-218ENST00000508044 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
RACK1-218ENST00000508044 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
RACK1-218ENST00000508044 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
RACK1-218ENST00000508044 NUP160Q12769 1436 aa18.57■□□□□ 0.56
RACK1-218ENST00000508044 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
RACK1-218ENST00000508044 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
RACK1-218ENST00000508044 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
RACK1-218ENST00000508044 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms