RNA–Protein interactions for RNA: ENST00000506733.5

ACSL1-207, Transcript of acyl-CoA synthetase long chain family member 1, humanhuman

TSL 2

Gene ACSL1, Length 2,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL1-207ENST00000506733 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
ACSL1-207ENST00000506733 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
ACSL1-207ENST00000506733 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
ACSL1-207ENST00000506733 HRCP23327 699 aa18.39■□□□□ 0.53
ACSL1-207ENST00000506733 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
ACSL1-207ENST00000506733 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
ACSL1-207ENST00000506733 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
ACSL1-207ENST00000506733 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
ACSL1-207ENST00000506733 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
ACSL1-207ENST00000506733 ABCC9O60706 1549 aa17.99■□□□□ 0.47
ACSL1-207ENST00000506733 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
ACSL1-207ENST00000506733 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
ACSL1-207ENST00000506733 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
ACSL1-207ENST00000506733 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
ACSL1-207ENST00000506733 NACADO15069 1562 aa17.54■□□□□ 0.4
ACSL1-207ENST00000506733 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
ACSL1-207ENST00000506733 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
ACSL1-207ENST00000506733 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
ACSL1-207ENST00000506733 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
ACSL1-207ENST00000506733 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
ACSL1-207ENST00000506733 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
ACSL1-207ENST00000506733 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
ACSL1-207ENST00000506733 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
ACSL1-207ENST00000506733 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
ACSL1-207ENST00000506733 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
ACSL1-207ENST00000506733 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
ACSL1-207ENST00000506733 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
ACSL1-207ENST00000506733 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
ACSL1-207ENST00000506733 MYT1Q01538 1121 aa16.79■□□□□ 0.28
ACSL1-207ENST00000506733 GTF3C3Q9Y5Q9 886 aa16.78■□□□□ 0.28
ACSL1-207ENST00000506733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.27
ACSL1-207ENST00000506733 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
ACSL1-207ENST00000506733 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
ACSL1-207ENST00000506733 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
ACSL1-207ENST00000506733 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
ACSL1-207ENST00000506733 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
ACSL1-207ENST00000506733 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
ACSL1-207ENST00000506733 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
ACSL1-207ENST00000506733 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
ACSL1-207ENST00000506733 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
ACSL1-207ENST00000506733 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
ACSL1-207ENST00000506733 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
ACSL1-207ENST00000506733 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
ACSL1-207ENST00000506733 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
ACSL1-207ENST00000506733 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
ACSL1-207ENST00000506733 WIZO95785 1651 aa16.3■□□□□ 0.2
ACSL1-207ENST00000506733 MIER1Q8N108 512 aa16.3■□□□□ 0.2
ACSL1-207ENST00000506733 CEP162Q5TB80 1403 aa16.27■□□□□ 0.2
ACSL1-207ENST00000506733 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
ACSL1-207ENST00000506733 BAZ1AQ9NRL2 1556 aaPredicted RBP16.18■□□□□ 0.18
ACSL1-207ENST00000506733 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
ACSL1-207ENST00000506733 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
ACSL1-207ENST00000506733 SOGA1O94964 1423 aa16.13■□□□□ 0.17
ACSL1-207ENST00000506733 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
ACSL1-207ENST00000506733 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
ACSL1-207ENST00000506733 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
ACSL1-207ENST00000506733 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
ACSL1-207ENST00000506733 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
ACSL1-207ENST00000506733 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
ACSL1-207ENST00000506733 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
ACSL1-207ENST00000506733 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
ACSL1-207ENST00000506733 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
ACSL1-207ENST00000506733 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.15
ACSL1-207ENST00000506733 EEA1Q15075 1411 aa16■□□□□ 0.15
ACSL1-207ENST00000506733 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
ACSL1-207ENST00000506733 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
ACSL1-207ENST00000506733 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
ACSL1-207ENST00000506733 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
ACSL1-207ENST00000506733 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
ACSL1-207ENST00000506733 ANP32EQ9BTT0 268 aa15.88■□□□□ 0.13
ACSL1-207ENST00000506733 CLIP1P30622 1438 aa15.85■□□□□ 0.13
ACSL1-207ENST00000506733 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
ACSL1-207ENST00000506733 CUX2O14529 1486 aa15.82■□□□□ 0.12
ACSL1-207ENST00000506733 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
ACSL1-207ENST00000506733 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
ACSL1-207ENST00000506733 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
ACSL1-207ENST00000506733 KIF21BO75037 1637 aa15.79■□□□□ 0.12
ACSL1-207ENST00000506733 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
ACSL1-207ENST00000506733 APLP2Q06481 763 aa15.77■□□□□ 0.12
ACSL1-207ENST00000506733 BCL11AQ9H165 835 aa15.77■□□□□ 0.11
ACSL1-207ENST00000506733 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
ACSL1-207ENST00000506733 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
ACSL1-207ENST00000506733 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
ACSL1-207ENST00000506733 RANGAP1P46060 587 aaPredicted RBP15.67■□□□□ 0.1
ACSL1-207ENST00000506733 BCANQ96GW7 911 aa15.65■□□□□ 0.1
ACSL1-207ENST00000506733 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
ACSL1-207ENST00000506733 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
ACSL1-207ENST00000506733 FKBP8Q14318 412 aa15.59■□□□□ 0.09
ACSL1-207ENST00000506733 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
ACSL1-207ENST00000506733 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
ACSL1-207ENST00000506733 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
ACSL1-207ENST00000506733 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
ACSL1-207ENST00000506733 RBM19Q9Y4C8 960 aaKnown RBP15.55■□□□□ 0.08
ACSL1-207ENST00000506733 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
ACSL1-207ENST00000506733 KIF21AQ7Z4S6 1674 aa15.52■□□□□ 0.08
ACSL1-207ENST00000506733 NESP48681 1621 aa15.48■□□□□ 0.07
ACSL1-207ENST00000506733 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
ACSL1-207ENST00000506733 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
ACSL1-207ENST00000506733 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
ACSL1-207ENST00000506733 WDR62O43379 1518 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms