RNA–Protein interactions for RNA: ENST00000506458.5

ZCCHC9-207, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 2

Gene ZCCHC9, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-207ENST00000506458 NISCHQ9Y2I1 1504 aa39.4■■■■□ 3.9
ZCCHC9-207ENST00000506458 CCDC180Q9P1Z9 1646 aa35.09■■■■□ 3.21
ZCCHC9-207ENST00000506458 ABCC9O60706 1549 aa34.75■■■■□ 3.15
ZCCHC9-207ENST00000506458 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
ZCCHC9-207ENST00000506458 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
ZCCHC9-207ENST00000506458 NACADO15069 1562 aa32.99■■■□□ 2.87
ZCCHC9-207ENST00000506458 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
ZCCHC9-207ENST00000506458 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
ZCCHC9-207ENST00000506458 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.81
ZCCHC9-207ENST00000506458 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
ZCCHC9-207ENST00000506458 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
ZCCHC9-207ENST00000506458 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
ZCCHC9-207ENST00000506458 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
ZCCHC9-207ENST00000506458 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
ZCCHC9-207ENST00000506458 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
ZCCHC9-207ENST00000506458 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.61
ZCCHC9-207ENST00000506458 CC2D2AQ9P2K1 1620 aa31.36■■■□□ 2.61
ZCCHC9-207ENST00000506458 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.57
ZCCHC9-207ENST00000506458 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
ZCCHC9-207ENST00000506458 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
ZCCHC9-207ENST00000506458 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
ZCCHC9-207ENST00000506458 MROH2BQ7Z745 1585 aa30.48■■■□□ 2.47
ZCCHC9-207ENST00000506458 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
ZCCHC9-207ENST00000506458 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
ZCCHC9-207ENST00000506458 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
ZCCHC9-207ENST00000506458 HMGXB3Q12766 1538 aa30.31■■■□□ 2.44
ZCCHC9-207ENST00000506458 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
ZCCHC9-207ENST00000506458 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
ZCCHC9-207ENST00000506458 WIZO95785 1651 aa30.18■■■□□ 2.42
ZCCHC9-207ENST00000506458 NESP48681 1621 aa30.04■■■□□ 2.4
ZCCHC9-207ENST00000506458 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
ZCCHC9-207ENST00000506458 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
ZCCHC9-207ENST00000506458 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
ZCCHC9-207ENST00000506458 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
ZCCHC9-207ENST00000506458 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
ZCCHC9-207ENST00000506458 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
ZCCHC9-207ENST00000506458 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
ZCCHC9-207ENST00000506458 CUX2O14529 1486 aa29.5■■■□□ 2.31
ZCCHC9-207ENST00000506458 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
ZCCHC9-207ENST00000506458 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
ZCCHC9-207ENST00000506458 CFTRP13569 1480 aa29.36■■■□□ 2.29
ZCCHC9-207ENST00000506458 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
ZCCHC9-207ENST00000506458 MRC2Q9UBG0 1479 aa29.29■■■□□ 2.28
ZCCHC9-207ENST00000506458 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
ZCCHC9-207ENST00000506458 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
ZCCHC9-207ENST00000506458 WDR62O43379 1518 aa29.2■■■□□ 2.26
ZCCHC9-207ENST00000506458 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
ZCCHC9-207ENST00000506458 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
ZCCHC9-207ENST00000506458 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
ZCCHC9-207ENST00000506458 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
ZCCHC9-207ENST00000506458 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
ZCCHC9-207ENST00000506458 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
ZCCHC9-207ENST00000506458 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
ZCCHC9-207ENST00000506458 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
ZCCHC9-207ENST00000506458 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
ZCCHC9-207ENST00000506458 CUX1P39880 1505 aa28.59■■■□□ 2.17
ZCCHC9-207ENST00000506458 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
ZCCHC9-207ENST00000506458 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
ZCCHC9-207ENST00000506458 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
ZCCHC9-207ENST00000506458 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
ZCCHC9-207ENST00000506458 FGD5Q6ZNL6 1462 aa28.52■■■□□ 2.16
ZCCHC9-207ENST00000506458 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
ZCCHC9-207ENST00000506458 SOGA1O94964 1423 aa28.42■■■□□ 2.14
ZCCHC9-207ENST00000506458 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
ZCCHC9-207ENST00000506458 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
ZCCHC9-207ENST00000506458 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
ZCCHC9-207ENST00000506458 CHD1O14646 1710 aa28.26■■■□□ 2.12
ZCCHC9-207ENST00000506458 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
ZCCHC9-207ENST00000506458 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
ZCCHC9-207ENST00000506458 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
ZCCHC9-207ENST00000506458 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
ZCCHC9-207ENST00000506458 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
ZCCHC9-207ENST00000506458 FBLN2P98095 1184 aa28.16■■■□□ 2.1
ZCCHC9-207ENST00000506458 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
ZCCHC9-207ENST00000506458 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
ZCCHC9-207ENST00000506458 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
ZCCHC9-207ENST00000506458 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
ZCCHC9-207ENST00000506458 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
ZCCHC9-207ENST00000506458 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
ZCCHC9-207ENST00000506458 MAGI1Q96QZ7 1491 aaPredicted RBP28.01■■■□□ 2.07
ZCCHC9-207ENST00000506458 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
ZCCHC9-207ENST00000506458 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
ZCCHC9-207ENST00000506458 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
ZCCHC9-207ENST00000506458 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
ZCCHC9-207ENST00000506458 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
ZCCHC9-207ENST00000506458 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
ZCCHC9-207ENST00000506458 ADAMTS12P58397 1594 aa27.88■■■□□ 2.05
ZCCHC9-207ENST00000506458 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
ZCCHC9-207ENST00000506458 GRIN2AQ12879 1464 aa27.77■■■□□ 2.04
ZCCHC9-207ENST00000506458 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
ZCCHC9-207ENST00000506458 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
ZCCHC9-207ENST00000506458 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
ZCCHC9-207ENST00000506458 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
ZCCHC9-207ENST00000506458 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
ZCCHC9-207ENST00000506458 ERCC6L2Q5T890 1561 aa27.62■■■□□ 2.01
ZCCHC9-207ENST00000506458 NUP160Q12769 1436 aa27.62■■■□□ 2.01
ZCCHC9-207ENST00000506458 KIF27Q86VH2 1401 aa27.61■■■□□ 2.01
ZCCHC9-207ENST00000506458 IGF1RP08069 1367 aa27.56■■■□□ 2
ZCCHC9-207ENST00000506458 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
ZCCHC9-207ENST00000506458 CUL7Q14999 1698 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms