RNA–Protein interactions for RNA: ENST00000506453.1

GRSF1-205, Transcript of G-rich RNA sequence binding factor 1, humanhuman

TSL 3

Gene GRSF1, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRSF1-205ENST00000506453 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
GRSF1-205ENST00000506453 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
GRSF1-205ENST00000506453 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
GRSF1-205ENST00000506453 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
GRSF1-205ENST00000506453 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
GRSF1-205ENST00000506453 FOXD1Q16676 465 aa22.02■■□□□ 1.12
GRSF1-205ENST00000506453 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
GRSF1-205ENST00000506453 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
GRSF1-205ENST00000506453 ADRA2BP18089 450 aa20.54■□□□□ 0.88
GRSF1-205ENST00000506453 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
GRSF1-205ENST00000506453 MSH5O43196 834 aa20.45■□□□□ 0.86
GRSF1-205ENST00000506453 ABCC9O60706 1549 aa20.44■□□□□ 0.86
GRSF1-205ENST00000506453 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
GRSF1-205ENST00000506453 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
GRSF1-205ENST00000506453 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
GRSF1-205ENST00000506453 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
GRSF1-205ENST00000506453 NACADO15069 1562 aa19.22■□□□□ 0.67
GRSF1-205ENST00000506453 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
GRSF1-205ENST00000506453 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
GRSF1-205ENST00000506453 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
GRSF1-205ENST00000506453 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
GRSF1-205ENST00000506453 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
GRSF1-205ENST00000506453 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
GRSF1-205ENST00000506453 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
GRSF1-205ENST00000506453 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
GRSF1-205ENST00000506453 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
GRSF1-205ENST00000506453 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
GRSF1-205ENST00000506453 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
GRSF1-205ENST00000506453 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
GRSF1-205ENST00000506453 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
GRSF1-205ENST00000506453 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
GRSF1-205ENST00000506453 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
GRSF1-205ENST00000506453 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
GRSF1-205ENST00000506453 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
GRSF1-205ENST00000506453 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
GRSF1-205ENST00000506453 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
GRSF1-205ENST00000506453 CUX2O14529 1486 aa17.93■□□□□ 0.46
GRSF1-205ENST00000506453 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
GRSF1-205ENST00000506453 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
GRSF1-205ENST00000506453 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
GRSF1-205ENST00000506453 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
GRSF1-205ENST00000506453 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
GRSF1-205ENST00000506453 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
GRSF1-205ENST00000506453 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
GRSF1-205ENST00000506453 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
GRSF1-205ENST00000506453 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
GRSF1-205ENST00000506453 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
GRSF1-205ENST00000506453 NESP48681 1621 aa17.45■□□□□ 0.38
GRSF1-205ENST00000506453 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
GRSF1-205ENST00000506453 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
GRSF1-205ENST00000506453 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
GRSF1-205ENST00000506453 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
GRSF1-205ENST00000506453 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
GRSF1-205ENST00000506453 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
GRSF1-205ENST00000506453 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
GRSF1-205ENST00000506453 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
GRSF1-205ENST00000506453 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
GRSF1-205ENST00000506453 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
GRSF1-205ENST00000506453 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
GRSF1-205ENST00000506453 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
GRSF1-205ENST00000506453 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
GRSF1-205ENST00000506453 WDR62O43379 1518 aa17.13■□□□□ 0.33
GRSF1-205ENST00000506453 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
GRSF1-205ENST00000506453 KCNA4P22459 653 aa17.11■□□□□ 0.33
GRSF1-205ENST00000506453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■■□ 19.5
GRSF1-205ENST00000506453 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
GRSF1-205ENST00000506453 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
GRSF1-205ENST00000506453 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
GRSF1-205ENST00000506453 CFTRP13569 1480 aa16.91■□□□□ 0.3
GRSF1-205ENST00000506453 WIZO95785 1651 aa16.85■□□□□ 0.29
GRSF1-205ENST00000506453 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
GRSF1-205ENST00000506453 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
GRSF1-205ENST00000506453 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
GRSF1-205ENST00000506453 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
GRSF1-205ENST00000506453 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
GRSF1-205ENST00000506453 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
GRSF1-205ENST00000506453 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
GRSF1-205ENST00000506453 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
GRSF1-205ENST00000506453 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
GRSF1-205ENST00000506453 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
GRSF1-205ENST00000506453 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
GRSF1-205ENST00000506453 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
GRSF1-205ENST00000506453 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
GRSF1-205ENST00000506453 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
GRSF1-205ENST00000506453 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
GRSF1-205ENST00000506453 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
GRSF1-205ENST00000506453 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
GRSF1-205ENST00000506453 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
GRSF1-205ENST00000506453 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
GRSF1-205ENST00000506453 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
GRSF1-205ENST00000506453 CAPN15O75808 1086 aa16.47■□□□□ 0.23
GRSF1-205ENST00000506453 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
GRSF1-205ENST00000506453 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
GRSF1-205ENST00000506453 DSG3P32926 999 aa16.44■□□□□ 0.22
GRSF1-205ENST00000506453 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■□□ 16.3
GRSF1-205ENST00000506453 CHD1O14646 1710 aa16.42■□□□□ 0.22
GRSF1-205ENST00000506453 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
GRSF1-205ENST00000506453 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
GRSF1-205ENST00000506453 FBLN2P98095 1184 aa16.34■□□□□ 0.21
GRSF1-205ENST00000506453 CLASP1Q7Z460 1538 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms