RNA–Protein interactions for RNA: ENST00000505716.1

UVSSA-204, Transcript of UV stimulated scaffold protein A, humanhuman

TSL 3

Gene UVSSA, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UVSSA-204ENST00000505716 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
UVSSA-204ENST00000505716 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
UVSSA-204ENST00000505716 ABCC9O60706 1549 aa26.38■■□□□ 1.81
UVSSA-204ENST00000505716 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
UVSSA-204ENST00000505716 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
UVSSA-204ENST00000505716 CCDC180Q9P1Z9 1646 aa25.53■■□□□ 1.68
UVSSA-204ENST00000505716 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
UVSSA-204ENST00000505716 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
UVSSA-204ENST00000505716 NACADO15069 1562 aa24.32■■□□□ 1.48
UVSSA-204ENST00000505716 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
UVSSA-204ENST00000505716 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
UVSSA-204ENST00000505716 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
UVSSA-204ENST00000505716 PHF23Q9BUL5 403 aaPredicted RBP23.97■■□□□ 1.43
UVSSA-204ENST00000505716 UNC13AQ9UPW8 1703 aa23.97■■□□□ 1.43
UVSSA-204ENST00000505716 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
UVSSA-204ENST00000505716 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
UVSSA-204ENST00000505716 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
UVSSA-204ENST00000505716 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
UVSSA-204ENST00000505716 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
UVSSA-204ENST00000505716 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
UVSSA-204ENST00000505716 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
UVSSA-204ENST00000505716 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
UVSSA-204ENST00000505716 CUX2O14529 1486 aa22.92■■□□□ 1.26
UVSSA-204ENST00000505716 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
UVSSA-204ENST00000505716 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
UVSSA-204ENST00000505716 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
UVSSA-204ENST00000505716 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
UVSSA-204ENST00000505716 NESP48681 1621 aa22.47■■□□□ 1.19
UVSSA-204ENST00000505716 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
UVSSA-204ENST00000505716 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
UVSSA-204ENST00000505716 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
UVSSA-204ENST00000505716 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
UVSSA-204ENST00000505716 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
UVSSA-204ENST00000505716 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
UVSSA-204ENST00000505716 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
UVSSA-204ENST00000505716 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
UVSSA-204ENST00000505716 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
UVSSA-204ENST00000505716 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
UVSSA-204ENST00000505716 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
UVSSA-204ENST00000505716 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
UVSSA-204ENST00000505716 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
UVSSA-204ENST00000505716 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
UVSSA-204ENST00000505716 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
UVSSA-204ENST00000505716 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
UVSSA-204ENST00000505716 WDR62O43379 1518 aa21.77■■□□□ 1.08
UVSSA-204ENST00000505716 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.05
UVSSA-204ENST00000505716 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.05
UVSSA-204ENST00000505716 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.05
UVSSA-204ENST00000505716 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
UVSSA-204ENST00000505716 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.03
UVSSA-204ENST00000505716 WIZO95785 1651 aa21.5■■□□□ 1.03
UVSSA-204ENST00000505716 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
UVSSA-204ENST00000505716 ARHGEF11O15085 1522 aa21.46■■□□□ 1.03
UVSSA-204ENST00000505716 CFTRP13569 1480 aa21.45■■□□□ 1.03
UVSSA-204ENST00000505716 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
UVSSA-204ENST00000505716 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
UVSSA-204ENST00000505716 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
UVSSA-204ENST00000505716 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
UVSSA-204ENST00000505716 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
UVSSA-204ENST00000505716 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
UVSSA-204ENST00000505716 TOP2AP11388 1531 aaKnown RBP21.21■□□□□ 0.99
UVSSA-204ENST00000505716 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
UVSSA-204ENST00000505716 KCNA4P22459 653 aa21.15■□□□□ 0.98
UVSSA-204ENST00000505716 ADRA2BP18089 450 aa21.08■□□□□ 0.97
UVSSA-204ENST00000505716 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
UVSSA-204ENST00000505716 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
UVSSA-204ENST00000505716 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.961e-8■■■■□ 24
UVSSA-204ENST00000505716 FBLN2P98095 1184 aa21.04■□□□□ 0.96
UVSSA-204ENST00000505716 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
UVSSA-204ENST00000505716 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
UVSSA-204ENST00000505716 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
UVSSA-204ENST00000505716 CHD1O14646 1710 aa20.95■□□□□ 0.94
UVSSA-204ENST00000505716 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
UVSSA-204ENST00000505716 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
UVSSA-204ENST00000505716 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
UVSSA-204ENST00000505716 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
UVSSA-204ENST00000505716 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
UVSSA-204ENST00000505716 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
UVSSA-204ENST00000505716 SOGA1O94964 1423 aa20.76■□□□□ 0.91
UVSSA-204ENST00000505716 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
UVSSA-204ENST00000505716 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
UVSSA-204ENST00000505716 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
UVSSA-204ENST00000505716 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
UVSSA-204ENST00000505716 ILDR1Q86SU0 546 aaPredicted RBP20.66■□□□□ 0.9
UVSSA-204ENST00000505716 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
UVSSA-204ENST00000505716 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
UVSSA-204ENST00000505716 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
UVSSA-204ENST00000505716 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
UVSSA-204ENST00000505716 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
UVSSA-204ENST00000505716 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
UVSSA-204ENST00000505716 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
UVSSA-204ENST00000505716 CUX1P39880 1505 aa20.53■□□□□ 0.88
UVSSA-204ENST00000505716 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
UVSSA-204ENST00000505716 KDM4FA0A1W2PPD8 638 aa20.49■□□□□ 0.87
UVSSA-204ENST00000505716 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
UVSSA-204ENST00000505716 FOXD1Q16676 465 aa20.37■□□□□ 0.85
UVSSA-204ENST00000505716 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
UVSSA-204ENST00000505716 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
UVSSA-204ENST00000505716 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
UVSSA-204ENST00000505716 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms