RNA–Protein interactions for RNA: ENST00000505665.5

PLXND1-210, Transcript of plexin D1, humanhuman

TSL 5

Gene PLXND1, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-210ENST00000505665 NISCHQ9Y2I1 1504 aa42.06■■■■■ 4.32
PLXND1-210ENST00000505665 CCDC180Q9P1Z9 1646 aa37.38■■■■□ 3.57
PLXND1-210ENST00000505665 ABCC9O60706 1549 aa36.64■■■■□ 3.46
PLXND1-210ENST00000505665 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
PLXND1-210ENST00000505665 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
PLXND1-210ENST00000505665 NACADO15069 1562 aa35.17■■■■□ 3.22
PLXND1-210ENST00000505665 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
PLXND1-210ENST00000505665 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
PLXND1-210ENST00000505665 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
PLXND1-210ENST00000505665 UNC13AQ9UPW8 1703 aa34.39■■■■□ 3.1
PLXND1-210ENST00000505665 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
PLXND1-210ENST00000505665 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
PLXND1-210ENST00000505665 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
PLXND1-210ENST00000505665 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
PLXND1-210ENST00000505665 DNAJC5BQ9UF47 199 aa33.66■■■□□ 2.98
PLXND1-210ENST00000505665 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
PLXND1-210ENST00000505665 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
PLXND1-210ENST00000505665 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
PLXND1-210ENST00000505665 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
PLXND1-210ENST00000505665 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
PLXND1-210ENST00000505665 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
PLXND1-210ENST00000505665 NCAPD3P42695 1498 aa32.46■■■□□ 2.79
PLXND1-210ENST00000505665 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
PLXND1-210ENST00000505665 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
PLXND1-210ENST00000505665 PEG3Q9GZU2 1588 aa32.31■■■□□ 2.76
PLXND1-210ENST00000505665 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
PLXND1-210ENST00000505665 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
PLXND1-210ENST00000505665 WIZO95785 1651 aa32.07■■■□□ 2.72
PLXND1-210ENST00000505665 RSF1Q96T23 1441 aaPredicted RBP32.05■■■□□ 2.72
PLXND1-210ENST00000505665 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
PLXND1-210ENST00000505665 NESP48681 1621 aa31.7■■■□□ 2.66
PLXND1-210ENST00000505665 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
PLXND1-210ENST00000505665 ERCC6Q03468 1493 aa31.58■■■□□ 2.65
PLXND1-210ENST00000505665 CADPSQ9ULU8 1353 aa31.52■■■□□ 2.64
PLXND1-210ENST00000505665 PDS5BQ9NTI5 1447 aa31.4■■■□□ 2.62
PLXND1-210ENST00000505665 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
PLXND1-210ENST00000505665 CFTRP13569 1480 aa31.32■■■□□ 2.6
PLXND1-210ENST00000505665 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
PLXND1-210ENST00000505665 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
PLXND1-210ENST00000505665 CUX2O14529 1486 aa31.23■■■□□ 2.59
PLXND1-210ENST00000505665 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.58
PLXND1-210ENST00000505665 FANCD2Q9BXW9 1451 aa31.15■■■□□ 2.58
PLXND1-210ENST00000505665 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
PLXND1-210ENST00000505665 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
PLXND1-210ENST00000505665 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
PLXND1-210ENST00000505665 WDR62O43379 1518 aa30.96■■■□□ 2.55
PLXND1-210ENST00000505665 URB2Q14146 1524 aaKnown RBP30.85■■■□□ 2.53
PLXND1-210ENST00000505665 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
PLXND1-210ENST00000505665 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
PLXND1-210ENST00000505665 DNMBPQ6XZF7 1577 aa30.61■■■□□ 2.49
PLXND1-210ENST00000505665 IFT140Q96RY7 1462 aa30.47■■■□□ 2.47
PLXND1-210ENST00000505665 CUX1P39880 1505 aa30.42■■■□□ 2.46
PLXND1-210ENST00000505665 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
PLXND1-210ENST00000505665 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
PLXND1-210ENST00000505665 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
PLXND1-210ENST00000505665 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
PLXND1-210ENST00000505665 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
PLXND1-210ENST00000505665 SOGA1O94964 1423 aa30.28■■■□□ 2.44
PLXND1-210ENST00000505665 RAD54L2Q9Y4B4 1467 aa30.27■■■□□ 2.44
PLXND1-210ENST00000505665 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
PLXND1-210ENST00000505665 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.43
PLXND1-210ENST00000505665 AQRO60306 1485 aaKnown RBP eCLIP30.17■■■□□ 2.423e-7■□□□□ 9
PLXND1-210ENST00000505665 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
PLXND1-210ENST00000505665 TOP2BQ02880 1626 aa30.14■■■□□ 2.41
PLXND1-210ENST00000505665 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
PLXND1-210ENST00000505665 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
PLXND1-210ENST00000505665 WDR97A6NE52 1622 aa30.05■■■□□ 2.4
PLXND1-210ENST00000505665 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
PLXND1-210ENST00000505665 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
PLXND1-210ENST00000505665 GRIN2BQ13224 1484 aa29.93■■■□□ 2.38
PLXND1-210ENST00000505665 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
PLXND1-210ENST00000505665 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
PLXND1-210ENST00000505665 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
PLXND1-210ENST00000505665 MAGI1Q96QZ7 1491 aaPredicted RBP29.84■■■□□ 2.37
PLXND1-210ENST00000505665 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
PLXND1-210ENST00000505665 FBLN2P98095 1184 aa29.83■■■□□ 2.37
PLXND1-210ENST00000505665 CHD1O14646 1710 aa29.82■■■□□ 2.36
PLXND1-210ENST00000505665 CHMP7Q8WUX9 453 aaPredicted RBP29.74■■■□□ 2.35
PLXND1-210ENST00000505665 SYNJ2O15056 1496 aa29.73■■■□□ 2.35
PLXND1-210ENST00000505665 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
PLXND1-210ENST00000505665 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
PLXND1-210ENST00000505665 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
PLXND1-210ENST00000505665 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
PLXND1-210ENST00000505665 GRIN2AQ12879 1464 aa29.54■■■□□ 2.32
PLXND1-210ENST00000505665 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
PLXND1-210ENST00000505665 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
PLXND1-210ENST00000505665 IGF1RP08069 1367 aa29.48■■■□□ 2.31
PLXND1-210ENST00000505665 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
PLXND1-210ENST00000505665 RIMBP3CA6NJZ7 1639 aa29.46■■■□□ 2.31
PLXND1-210ENST00000505665 RIMBP3BA6NNM3 1639 aa29.46■■■□□ 2.31
PLXND1-210ENST00000505665 RIMBP3Q9UFD9 1639 aa29.46■■■□□ 2.31
PLXND1-210ENST00000505665 NUP160Q12769 1436 aa29.4■■■□□ 2.3
PLXND1-210ENST00000505665 CEP170Q5SW79 1584 aa29.39■■■□□ 2.29
PLXND1-210ENST00000505665 CUL7Q14999 1698 aa29.37■■■□□ 2.29
PLXND1-210ENST00000505665 RUSC2Q8N2Y8 1516 aa29.33■■■□□ 2.29
PLXND1-210ENST00000505665 CARMIL1Q5VZK9 1371 aa29.31■■■□□ 2.28
PLXND1-210ENST00000505665 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
PLXND1-210ENST00000505665 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
PLXND1-210ENST00000505665 SHROOM2Q13796 1616 aa29.17■■■□□ 2.26
PLXND1-210ENST00000505665 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms