RNA–Protein interactions for RNA: ENST00000505341.1

C15orf40-203, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 2

Gene C15orf40, Length 1,881 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-203ENST00000505341 NISCHQ9Y2I1 1504 aa47.18■■■■■ 5.14
C15orf40-203ENST00000505341 CCDC180Q9P1Z9 1646 aa41.24■■■■■ 4.19
C15orf40-203ENST00000505341 ZCCHC6Q5VYS8 1495 aaKnown RBP39.61■■■■□ 3.93
C15orf40-203ENST00000505341 ABCC9O60706 1549 aa39.11■■■■□ 3.85
C15orf40-203ENST00000505341 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
C15orf40-203ENST00000505341 DCAF8L2P0C7V8 631 aa38.95■■■■□ 3.83
C15orf40-203ENST00000505341 MYO15BQ96JP2 1530 aa38.6■■■■□ 3.77
C15orf40-203ENST00000505341 NACADO15069 1562 aa38.42■■■■□ 3.74
C15orf40-203ENST00000505341 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
C15orf40-203ENST00000505341 RB1CC1Q8TDY2 1594 aa38.13■■■■□ 3.69
C15orf40-203ENST00000505341 SCRIBQ14160 1630 aa37.91■■■■□ 3.66
C15orf40-203ENST00000505341 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
C15orf40-203ENST00000505341 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
C15orf40-203ENST00000505341 PABPN1Q86U42 306 aaKnown RBP eCLIP36.83■■■■□ 3.49
C15orf40-203ENST00000505341 SUPT5HO00267 1087 aaKnown RBP36.79■■■■□ 3.48
C15orf40-203ENST00000505341 CECR2Q9BXF3 1484 aa36.68■■■■□ 3.46
C15orf40-203ENST00000505341 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
C15orf40-203ENST00000505341 MROH2BQ7Z745 1585 aa36.45■■■■□ 3.43
C15orf40-203ENST00000505341 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
C15orf40-203ENST00000505341 SMARCA4P51532 1647 aa36.32■■■■□ 3.41
C15orf40-203ENST00000505341 WIZO95785 1651 aa36.17■■■■□ 3.38
C15orf40-203ENST00000505341 EIF4G1Q04637 1599 aaKnown RBP35.9■■■■□ 3.34
C15orf40-203ENST00000505341 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
C15orf40-203ENST00000505341 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
C15orf40-203ENST00000505341 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
C15orf40-203ENST00000505341 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
C15orf40-203ENST00000505341 BAZ1BQ9UIG0 1483 aaKnown RBP35.53■■■■□ 3.28
C15orf40-203ENST00000505341 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
C15orf40-203ENST00000505341 CC2D2AQ9P2K1 1620 aa35.42■■■■□ 3.26
C15orf40-203ENST00000505341 HMGXB3Q12766 1538 aa35.41■■■■□ 3.26
C15orf40-203ENST00000505341 CCDC88BA6NC98 1476 aa35.39■■■■□ 3.26
C15orf40-203ENST00000505341 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
C15orf40-203ENST00000505341 CFTRP13569 1480 aa34.63■■■■□ 3.13
C15orf40-203ENST00000505341 DNAJC5BQ9UF47 199 aa34.63■■■■□ 3.13
C15orf40-203ENST00000505341 ABCC8Q09428 1581 aa34.63■■■■□ 3.13
C15orf40-203ENST00000505341 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
C15orf40-203ENST00000505341 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
C15orf40-203ENST00000505341 PRDM2Q13029 1718 aa34.5■■■■□ 3.11
C15orf40-203ENST00000505341 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
C15orf40-203ENST00000505341 NESP48681 1621 aa34.31■■■■□ 3.08
C15orf40-203ENST00000505341 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
C15orf40-203ENST00000505341 LAMC3Q9Y6N6 1575 aa34.29■■■■□ 3.08
C15orf40-203ENST00000505341 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
C15orf40-203ENST00000505341 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
C15orf40-203ENST00000505341 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
C15orf40-203ENST00000505341 CUX1P39880 1505 aa34.1■■■■□ 3.05
C15orf40-203ENST00000505341 PDS5BQ9NTI5 1447 aa33.99■■■■□ 3.03
C15orf40-203ENST00000505341 FAM9AQ8IZU1 332 aaPredicted RBP33.97■■■■□ 3.03
C15orf40-203ENST00000505341 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
C15orf40-203ENST00000505341 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
C15orf40-203ENST00000505341 SOGA1O94964 1423 aa33.92■■■■□ 3.02
C15orf40-203ENST00000505341 DNMBPQ6XZF7 1577 aa33.84■■■■□ 3.01
C15orf40-203ENST00000505341 RUSC2Q8N2Y8 1516 aa33.81■■■■□ 3
C15orf40-203ENST00000505341 LOC105371045A0A1W2PR82 267 aa33.8■■■■□ 3
C15orf40-203ENST00000505341 TOPBP1Q92547 1522 aa33.78■■■■□ 3
C15orf40-203ENST00000505341 EEA1Q15075 1411 aa33.77■■■■□ 3
C15orf40-203ENST00000505341 URB2Q14146 1524 aaKnown RBP33.76■■■□□ 2.99
C15orf40-203ENST00000505341 FGD5Q6ZNL6 1462 aa33.75■■■□□ 2.99
C15orf40-203ENST00000505341 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
C15orf40-203ENST00000505341 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
C15orf40-203ENST00000505341 MRC2Q9UBG0 1479 aa33.59■■■□□ 2.97
C15orf40-203ENST00000505341 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
C15orf40-203ENST00000505341 KIF27Q86VH2 1401 aa33.51■■■□□ 2.96
C15orf40-203ENST00000505341 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.96
C15orf40-203ENST00000505341 RAD54L2Q9Y4B4 1467 aa33.49■■■□□ 2.95
C15orf40-203ENST00000505341 CUX2O14529 1486 aa33.48■■■□□ 2.95
C15orf40-203ENST00000505341 WDR62O43379 1518 aa33.45■■■□□ 2.94
C15orf40-203ENST00000505341 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
C15orf40-203ENST00000505341 THOC2Q8NI27 1593 aaKnown RBP33.4■■■□□ 2.94
C15orf40-203ENST00000505341 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
C15orf40-203ENST00000505341 KIF21BO75037 1637 aa33.4■■■□□ 2.94
C15orf40-203ENST00000505341 GOLGA3Q08378 1498 aa33.33■■■□□ 2.93
C15orf40-203ENST00000505341 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
C15orf40-203ENST00000505341 PRXQ9BXM0 1461 aa33.27■■■□□ 2.92
C15orf40-203ENST00000505341 RAPGEF2Q9Y4G8 1499 aa33.24■■■□□ 2.91
C15orf40-203ENST00000505341 IGF1RP08069 1367 aa33.24■■■□□ 2.91
C15orf40-203ENST00000505341 ABCA5Q8WWZ7 1642 aa33.21■■■□□ 2.91
C15orf40-203ENST00000505341 ERICH3Q5RHP9 1530 aa33.2■■■□□ 2.9
C15orf40-203ENST00000505341 TNIKQ9UKE5 1360 aa33.17■■■□□ 2.9
C15orf40-203ENST00000505341 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
C15orf40-203ENST00000505341 UBTFP17480 764 aaKnown RBP33.15■■■□□ 2.9
C15orf40-203ENST00000505341 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
C15orf40-203ENST00000505341 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
C15orf40-203ENST00000505341 CARMIL1Q5VZK9 1371 aa33.06■■■□□ 2.88
C15orf40-203ENST00000505341 CUL7Q14999 1698 aa33.03■■■□□ 2.88
C15orf40-203ENST00000505341 CEP162Q5TB80 1403 aa33.01■■■□□ 2.88
C15orf40-203ENST00000505341 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
C15orf40-203ENST00000505341 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
C15orf40-203ENST00000505341 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.876e-6■■■■□ 25.1
C15orf40-203ENST00000505341 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
C15orf40-203ENST00000505341 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
C15orf40-203ENST00000505341 CLIP1P30622 1438 aa32.79■■■□□ 2.84
C15orf40-203ENST00000505341 ADAMTS12P58397 1594 aa32.78■■■□□ 2.84
C15orf40-203ENST00000505341 FHAD1B1AJZ9 1412 aa32.74■■■□□ 2.83
C15orf40-203ENST00000505341 SNAPC4Q5SXM2 1469 aa32.69■■■□□ 2.82
C15orf40-203ENST00000505341 RANGAP1P46060 587 aaPredicted RBP32.68■■■□□ 2.82
C15orf40-203ENST00000505341 CTTNBP2Q8WZ74 1663 aa32.67■■■□□ 2.82
C15orf40-203ENST00000505341 MAGI1Q96QZ7 1491 aaPredicted RBP32.62■■■□□ 2.81
C15orf40-203ENST00000505341 ARHGAP35Q9NRY4 1499 aa32.53■■■□□ 2.8
C15orf40-203ENST00000505341 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms