RNA–Protein interactions for RNA: ENST00000505278.1

PLXNA1-204, Transcript of plexin A1, humanhuman

TSL 4

Gene PLXNA1, Length 536 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-204ENST00000505278 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
PLXNA1-204ENST00000505278 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
PLXNA1-204ENST00000505278 ABCC9O60706 1549 aa36.22■■■■□ 3.39
PLXNA1-204ENST00000505278 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
PLXNA1-204ENST00000505278 NACADO15069 1562 aa34.95■■■■□ 3.18
PLXNA1-204ENST00000505278 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
PLXNA1-204ENST00000505278 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
PLXNA1-204ENST00000505278 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
PLXNA1-204ENST00000505278 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
PLXNA1-204ENST00000505278 UNC13AQ9UPW8 1703 aa34■■■■□ 3.03
PLXNA1-204ENST00000505278 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
PLXNA1-204ENST00000505278 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
PLXNA1-204ENST00000505278 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
PLXNA1-204ENST00000505278 SHROOM4Q9ULL8 1493 aa33.66■■■□□ 2.98
PLXNA1-204ENST00000505278 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
PLXNA1-204ENST00000505278 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
PLXNA1-204ENST00000505278 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
PLXNA1-204ENST00000505278 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
PLXNA1-204ENST00000505278 BAZ1AQ9NRL2 1556 aaPredicted RBP32.43■■■□□ 2.78
PLXNA1-204ENST00000505278 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
PLXNA1-204ENST00000505278 SMARCA2P51531 1590 aa32.25■■■□□ 2.75
PLXNA1-204ENST00000505278 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
PLXNA1-204ENST00000505278 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
PLXNA1-204ENST00000505278 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
PLXNA1-204ENST00000505278 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
PLXNA1-204ENST00000505278 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
PLXNA1-204ENST00000505278 BAZ1BQ9UIG0 1483 aaKnown RBP31.99■■■□□ 2.71
PLXNA1-204ENST00000505278 RSF1Q96T23 1441 aaPredicted RBP31.84■■■□□ 2.69
PLXNA1-204ENST00000505278 WIZO95785 1651 aa31.78■■■□□ 2.68
PLXNA1-204ENST00000505278 TOP2AP11388 1531 aaKnown RBP31.55■■■□□ 2.64
PLXNA1-204ENST00000505278 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
PLXNA1-204ENST00000505278 NESP48681 1621 aa31.32■■■□□ 2.6
PLXNA1-204ENST00000505278 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
PLXNA1-204ENST00000505278 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
PLXNA1-204ENST00000505278 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
PLXNA1-204ENST00000505278 CCDC88BA6NC98 1476 aa31.13■■■□□ 2.57
PLXNA1-204ENST00000505278 CFTRP13569 1480 aa31.12■■■□□ 2.57
PLXNA1-204ENST00000505278 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
PLXNA1-204ENST00000505278 CUX2O14529 1486 aa30.98■■■□□ 2.55
PLXNA1-204ENST00000505278 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
PLXNA1-204ENST00000505278 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
PLXNA1-204ENST00000505278 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
PLXNA1-204ENST00000505278 THOC2Q8NI27 1593 aaKnown RBP30.9■■■□□ 2.54
PLXNA1-204ENST00000505278 MRC2Q9UBG0 1479 aa30.84■■■□□ 2.53
PLXNA1-204ENST00000505278 PRDM2Q13029 1718 aa30.82■■■□□ 2.52
PLXNA1-204ENST00000505278 WDR62O43379 1518 aa30.73■■■□□ 2.51
PLXNA1-204ENST00000505278 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
PLXNA1-204ENST00000505278 ABCC8Q09428 1581 aa30.51■■■□□ 2.47
PLXNA1-204ENST00000505278 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
PLXNA1-204ENST00000505278 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
PLXNA1-204ENST00000505278 IFT140Q96RY7 1462 aa30.26■■■□□ 2.44
PLXNA1-204ENST00000505278 CUX1P39880 1505 aa30.18■■■□□ 2.42
PLXNA1-204ENST00000505278 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
PLXNA1-204ENST00000505278 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
PLXNA1-204ENST00000505278 WRNQ14191 1432 aaPredicted RBP eCLIP30.06■■■□□ 2.4
PLXNA1-204ENST00000505278 TARBP1Q13395 1621 aaKnown RBP30.05■■■□□ 2.4
PLXNA1-204ENST00000505278 SOGA1O94964 1423 aa30.05■■■□□ 2.4
PLXNA1-204ENST00000505278 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.4
PLXNA1-204ENST00000505278 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
PLXNA1-204ENST00000505278 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
PLXNA1-204ENST00000505278 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
PLXNA1-204ENST00000505278 WDR97A6NE52 1622 aa29.95■■■□□ 2.38
PLXNA1-204ENST00000505278 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
PLXNA1-204ENST00000505278 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
PLXNA1-204ENST00000505278 DNAJC5Q9H3Z4 198 aa29.88■■■□□ 2.37
PLXNA1-204ENST00000505278 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.379e-6■□□□□ 10.2
PLXNA1-204ENST00000505278 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
PLXNA1-204ENST00000505278 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
PLXNA1-204ENST00000505278 GRIN2BQ13224 1484 aa29.73■■■□□ 2.35
PLXNA1-204ENST00000505278 GAPVD1Q14C86 1478 aa29.71■■■□□ 2.35
PLXNA1-204ENST00000505278 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
PLXNA1-204ENST00000505278 OSCARQ8IYS5 282 aa29.66■■■□□ 2.34
PLXNA1-204ENST00000505278 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
PLXNA1-204ENST00000505278 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
PLXNA1-204ENST00000505278 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
PLXNA1-204ENST00000505278 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
PLXNA1-204ENST00000505278 FBLN2P98095 1184 aa29.51■■■□□ 2.31
PLXNA1-204ENST00000505278 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
PLXNA1-204ENST00000505278 CHD1O14646 1710 aa29.49■■■□□ 2.31
PLXNA1-204ENST00000505278 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
PLXNA1-204ENST00000505278 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
PLXNA1-204ENST00000505278 ADAMTS12P58397 1594 aa29.41■■■□□ 2.3
PLXNA1-204ENST00000505278 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
PLXNA1-204ENST00000505278 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
PLXNA1-204ENST00000505278 GRIN2AQ12879 1464 aa29.32■■■□□ 2.28
PLXNA1-204ENST00000505278 IGF1RP08069 1367 aa29.27■■■□□ 2.28
PLXNA1-204ENST00000505278 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
PLXNA1-204ENST00000505278 CUL7Q14999 1698 aa29.24■■■□□ 2.27
PLXNA1-204ENST00000505278 NUP160Q12769 1436 aa29.2■■■□□ 2.27
PLXNA1-204ENST00000505278 ARHGEF11O15085 1522 aa29.16■■■□□ 2.26
PLXNA1-204ENST00000505278 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
PLXNA1-204ENST00000505278 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
PLXNA1-204ENST00000505278 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
PLXNA1-204ENST00000505278 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
PLXNA1-204ENST00000505278 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
PLXNA1-204ENST00000505278 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
PLXNA1-204ENST00000505278 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
PLXNA1-204ENST00000505278 EEA1Q15075 1411 aa28.99■■■□□ 2.23
PLXNA1-204ENST00000505278 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
PLXNA1-204ENST00000505278 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms