RNA–Protein interactions for RNA: ENST00000505007.5

UBE2D2-204, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 3

Gene UBE2D2, Length 1,170 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-204ENST00000505007 NISCHQ9Y2I1 1504 aa47.35■■■■■ 5.17
UBE2D2-204ENST00000505007 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
UBE2D2-204ENST00000505007 ABCC9O60706 1549 aa41.88■■■■■ 4.29
UBE2D2-204ENST00000505007 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
UBE2D2-204ENST00000505007 NACADO15069 1562 aa39.89■■■■□ 3.98
UBE2D2-204ENST00000505007 DCAF8L2P0C7V8 631 aa39.8■■■■□ 3.96
UBE2D2-204ENST00000505007 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
UBE2D2-204ENST00000505007 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
UBE2D2-204ENST00000505007 UNC13AQ9UPW8 1703 aa39.21■■■■□ 3.87
UBE2D2-204ENST00000505007 DCAF1Q9Y4B6 1507 aa39.13■■■■□ 3.85
UBE2D2-204ENST00000505007 PABPN1Q86U42 306 aaKnown RBP eCLIP39.06■■■■□ 3.84
UBE2D2-204ENST00000505007 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
UBE2D2-204ENST00000505007 DNAJC5BQ9UF47 199 aa38.84■■■■□ 3.81
UBE2D2-204ENST00000505007 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
UBE2D2-204ENST00000505007 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
UBE2D2-204ENST00000505007 EIF4G1Q04637 1599 aaKnown RBP37.89■■■■□ 3.66
UBE2D2-204ENST00000505007 CC2D2AQ9P2K1 1620 aa37.86■■■■□ 3.65
UBE2D2-204ENST00000505007 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
UBE2D2-204ENST00000505007 SMARCA4P51532 1647 aa36.88■■■■□ 3.49
UBE2D2-204ENST00000505007 NCAPD3P42695 1498 aa36.79■■■■□ 3.48
UBE2D2-204ENST00000505007 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
UBE2D2-204ENST00000505007 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
UBE2D2-204ENST00000505007 SMARCA2P51531 1590 aa36.7■■■■□ 3.46
UBE2D2-204ENST00000505007 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
UBE2D2-204ENST00000505007 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
UBE2D2-204ENST00000505007 PEG3Q9GZU2 1588 aa36.48■■■■□ 3.43
UBE2D2-204ENST00000505007 BAZ1BQ9UIG0 1483 aaKnown RBP36.45■■■■□ 3.43
UBE2D2-204ENST00000505007 ERCC6Q03468 1493 aa36.13■■■■□ 3.37
UBE2D2-204ENST00000505007 WIZO95785 1651 aa36.12■■■■□ 3.37
UBE2D2-204ENST00000505007 NESP48681 1621 aa36.11■■■■□ 3.37
UBE2D2-204ENST00000505007 LAMC3Q9Y6N6 1575 aa35.92■■■■□ 3.34
UBE2D2-204ENST00000505007 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
UBE2D2-204ENST00000505007 CUX2O14529 1486 aa35.88■■■■□ 3.33
UBE2D2-204ENST00000505007 KIF21AQ7Z4S6 1674 aa35.7■■■■□ 3.31
UBE2D2-204ENST00000505007 CADPSQ9ULU8 1353 aa35.7■■■■□ 3.31
UBE2D2-204ENST00000505007 PDS5BQ9NTI5 1447 aa35.68■■■■□ 3.3
UBE2D2-204ENST00000505007 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
UBE2D2-204ENST00000505007 THOC2Q8NI27 1593 aaKnown RBP35.66■■■■□ 3.3
UBE2D2-204ENST00000505007 CFTRP13569 1480 aa35.4■■■■□ 3.26
UBE2D2-204ENST00000505007 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
UBE2D2-204ENST00000505007 DNAJC5Q9H3Z4 198 aa35.32■■■■□ 3.24
UBE2D2-204ENST00000505007 FANCD2Q9BXW9 1451 aa35.32■■■■□ 3.24
UBE2D2-204ENST00000505007 CEP164Q9UPV0 1460 aa35.32■■■■□ 3.24
UBE2D2-204ENST00000505007 WDR62O43379 1518 aa35.27■■■■□ 3.24
UBE2D2-204ENST00000505007 CCDC88BA6NC98 1476 aa35.25■■■■□ 3.23
UBE2D2-204ENST00000505007 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
UBE2D2-204ENST00000505007 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
UBE2D2-204ENST00000505007 TOPBP1Q92547 1522 aa34.7■■■■□ 3.14
UBE2D2-204ENST00000505007 SUPT5HO00267 1087 aaKnown RBP34.68■■■■□ 3.14
UBE2D2-204ENST00000505007 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
UBE2D2-204ENST00000505007 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
UBE2D2-204ENST00000505007 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
UBE2D2-204ENST00000505007 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
UBE2D2-204ENST00000505007 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
UBE2D2-204ENST00000505007 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
UBE2D2-204ENST00000505007 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
UBE2D2-204ENST00000505007 OSCARQ8IYS5 282 aa34.31■■■■□ 3.08
UBE2D2-204ENST00000505007 CUX1P39880 1505 aa34.28■■■■□ 3.08
UBE2D2-204ENST00000505007 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
UBE2D2-204ENST00000505007 AQRO60306 1485 aaKnown RBP eCLIP34.24■■■■□ 3.072e-7■■■□□ 17.7
UBE2D2-204ENST00000505007 FGD5Q6ZNL6 1462 aa34.24■■■■□ 3.07
UBE2D2-204ENST00000505007 SOGA1O94964 1423 aa34.21■■■■□ 3.07
UBE2D2-204ENST00000505007 TDRD9Q8NDG6 1382 aaKnown RBP34.1■■■■□ 3.05
UBE2D2-204ENST00000505007 CHD1O14646 1710 aa34.04■■■■□ 3.04
UBE2D2-204ENST00000505007 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
UBE2D2-204ENST00000505007 TRIM41Q8WV44 630 aa34.02■■■■□ 3.04
UBE2D2-204ENST00000505007 FBLN2P98095 1184 aa33.93■■■■□ 3.02
UBE2D2-204ENST00000505007 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
UBE2D2-204ENST00000505007 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
UBE2D2-204ENST00000505007 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
UBE2D2-204ENST00000505007 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
UBE2D2-204ENST00000505007 RIMBP3CA6NJZ7 1639 aa33.86■■■■□ 3.01
UBE2D2-204ENST00000505007 RIMBP3BA6NNM3 1639 aa33.86■■■■□ 3.01
UBE2D2-204ENST00000505007 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
UBE2D2-204ENST00000505007 RIMBP3Q9UFD9 1639 aa33.86■■■■□ 3.01
UBE2D2-204ENST00000505007 ABCA10Q8WWZ4 1543 aa33.85■■■■□ 3.01
UBE2D2-204ENST00000505007 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
UBE2D2-204ENST00000505007 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
UBE2D2-204ENST00000505007 GAPVD1Q14C86 1478 aa33.82■■■■□ 3.01
UBE2D2-204ENST00000505007 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3.01
UBE2D2-204ENST00000505007 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
UBE2D2-204ENST00000505007 ARHGEF11O15085 1522 aa33.79■■■■□ 3
UBE2D2-204ENST00000505007 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
UBE2D2-204ENST00000505007 SYNJ2O15056 1496 aa33.71■■■□□ 2.99
UBE2D2-204ENST00000505007 CLASP1Q7Z460 1538 aa33.61■■■□□ 2.97
UBE2D2-204ENST00000505007 ADAMTS12P58397 1594 aa33.51■■■□□ 2.95
UBE2D2-204ENST00000505007 CYB5RLQ6IPT4 315 aa33.5■■■□□ 2.95
UBE2D2-204ENST00000505007 ARAP1Q96P48 1450 aa33.48■■■□□ 2.95
UBE2D2-204ENST00000505007 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
UBE2D2-204ENST00000505007 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
UBE2D2-204ENST00000505007 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
UBE2D2-204ENST00000505007 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
UBE2D2-204ENST00000505007 NUP160Q12769 1436 aa33.3■■■□□ 2.92
UBE2D2-204ENST00000505007 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
UBE2D2-204ENST00000505007 ERCC6L2Q5T890 1561 aa33.14■■■□□ 2.9
UBE2D2-204ENST00000505007 SHROOM2Q13796 1616 aa33.13■■■□□ 2.89
UBE2D2-204ENST00000505007 IGF1RP08069 1367 aa33.1■■■□□ 2.89
UBE2D2-204ENST00000505007 CUL7Q14999 1698 aa33.07■■■□□ 2.89
UBE2D2-204ENST00000505007 RUSC2Q8N2Y8 1516 aa33.03■■■□□ 2.88
UBE2D2-204ENST00000505007 TRHP20396 242 aaPredicted RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms