RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
SDHC-207ENST00000504963 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
SDHC-207ENST00000504963 AEBP2Q6ZN18 517 aaPredicted RBP14.11□□□□□ -0.15
SDHC-207ENST00000504963 ABCC9O60706 1549 aa13.65□□□□□ -0.22
SDHC-207ENST00000504963 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
SDHC-207ENST00000504963 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
SDHC-207ENST00000504963 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
SDHC-207ENST00000504963 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
SDHC-207ENST00000504963 NACADO15069 1562 aa13.24□□□□□ -0.29
SDHC-207ENST00000504963 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
SDHC-207ENST00000504963 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
SDHC-207ENST00000504963 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
SDHC-207ENST00000504963 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
SDHC-207ENST00000504963 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
SDHC-207ENST00000504963 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
SDHC-207ENST00000504963 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
SDHC-207ENST00000504963 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
SDHC-207ENST00000504963 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
SDHC-207ENST00000504963 EIF4G1Q04637 1599 aaKnown RBP12.46□□□□□ -0.42
SDHC-207ENST00000504963 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
SDHC-207ENST00000504963 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
SDHC-207ENST00000504963 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
SDHC-207ENST00000504963 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
SDHC-207ENST00000504963 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
SDHC-207ENST00000504963 WIZO95785 1651 aa12.35□□□□□ -0.43
SDHC-207ENST00000504963 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
SDHC-207ENST00000504963 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
SDHC-207ENST00000504963 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
SDHC-207ENST00000504963 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
SDHC-207ENST00000504963 NCAPD3P42695 1498 aa12.23□□□□□ -0.45
SDHC-207ENST00000504963 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
SDHC-207ENST00000504963 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
SDHC-207ENST00000504963 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
SDHC-207ENST00000504963 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
SDHC-207ENST00000504963 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
SDHC-207ENST00000504963 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
SDHC-207ENST00000504963 NESP48681 1621 aa11.93□□□□□ -0.5
SDHC-207ENST00000504963 CFTRP13569 1480 aa11.89□□□□□ -0.51
SDHC-207ENST00000504963 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
SDHC-207ENST00000504963 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
SDHC-207ENST00000504963 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
SDHC-207ENST00000504963 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
SDHC-207ENST00000504963 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
SDHC-207ENST00000504963 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
SDHC-207ENST00000504963 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
SDHC-207ENST00000504963 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
SDHC-207ENST00000504963 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
SDHC-207ENST00000504963 URB2Q14146 1524 aaKnown RBP11.67□□□□□ -0.54
SDHC-207ENST00000504963 CUX2O14529 1486 aa11.67□□□□□ -0.54
SDHC-207ENST00000504963 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
SDHC-207ENST00000504963 CUX1P39880 1505 aa11.66□□□□□ -0.54
SDHC-207ENST00000504963 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
SDHC-207ENST00000504963 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
SDHC-207ENST00000504963 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
SDHC-207ENST00000504963 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
SDHC-207ENST00000504963 BIVM-ERCC5R4GMW8 1640 aa11.61□□□□□ -0.55
SDHC-207ENST00000504963 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
SDHC-207ENST00000504963 WDR62O43379 1518 aa11.6□□□□□ -0.55
SDHC-207ENST00000504963 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
SDHC-207ENST00000504963 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
SDHC-207ENST00000504963 POTEDQ86YR6 584 aa11.56□□□□□ -0.56
SDHC-207ENST00000504963 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
SDHC-207ENST00000504963 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
SDHC-207ENST00000504963 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
SDHC-207ENST00000504963 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SDHC-207ENST00000504963 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
SDHC-207ENST00000504963 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
SDHC-207ENST00000504963 RUSC2Q8N2Y8 1516 aa11.44□□□□□ -0.58
SDHC-207ENST00000504963 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
SDHC-207ENST00000504963 SOGA1O94964 1423 aa11.43□□□□□ -0.58
SDHC-207ENST00000504963 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
SDHC-207ENST00000504963 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
SDHC-207ENST00000504963 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
SDHC-207ENST00000504963 FOXD1Q16676 465 aa11.38□□□□□ -0.59
SDHC-207ENST00000504963 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
SDHC-207ENST00000504963 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
SDHC-207ENST00000504963 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
SDHC-207ENST00000504963 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
SDHC-207ENST00000504963 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
SDHC-207ENST00000504963 IGF1RP08069 1367 aa11.3□□□□□ -0.6
SDHC-207ENST00000504963 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
SDHC-207ENST00000504963 ERICH3Q5RHP9 1530 aa11.27□□□□□ -0.61
SDHC-207ENST00000504963 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
SDHC-207ENST00000504963 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
SDHC-207ENST00000504963 ADAMTS12P58397 1594 aa11.25□□□□□ -0.61
SDHC-207ENST00000504963 EEA1Q15075 1411 aa11.25□□□□□ -0.61
SDHC-207ENST00000504963 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
SDHC-207ENST00000504963 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
SDHC-207ENST00000504963 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
SDHC-207ENST00000504963 CHD1O14646 1710 aa11.21□□□□□ -0.61
SDHC-207ENST00000504963 CUL7Q14999 1698 aa11.21□□□□□ -0.61
SDHC-207ENST00000504963 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
SDHC-207ENST00000504963 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
SDHC-207ENST00000504963 KIF21BO75037 1637 aa11.2□□□□□ -0.62
SDHC-207ENST00000504963 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
SDHC-207ENST00000504963 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
SDHC-207ENST00000504963 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
SDHC-207ENST00000504963 GRIN2AQ12879 1464 aa11.15□□□□□ -0.62
SDHC-207ENST00000504963 CEP170Q5SW79 1584 aa11.14□□□□□ -0.63
SDHC-207ENST00000504963 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms