RNA–Protein interactions for RNA: ENST00000504949.1

RHOBTB3-205, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-205ENST00000504949 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
RHOBTB3-205ENST00000504949 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
RHOBTB3-205ENST00000504949 ABCC9O60706 1549 aa23.79■■□□□ 1.4
RHOBTB3-205ENST00000504949 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
RHOBTB3-205ENST00000504949 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
RHOBTB3-205ENST00000504949 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
RHOBTB3-205ENST00000504949 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
RHOBTB3-205ENST00000504949 NACADO15069 1562 aa23.19■■□□□ 1.3
RHOBTB3-205ENST00000504949 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
RHOBTB3-205ENST00000504949 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
RHOBTB3-205ENST00000504949 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
RHOBTB3-205ENST00000504949 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
RHOBTB3-205ENST00000504949 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
RHOBTB3-205ENST00000504949 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
RHOBTB3-205ENST00000504949 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
RHOBTB3-205ENST00000504949 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.07
RHOBTB3-205ENST00000504949 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
RHOBTB3-205ENST00000504949 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
RHOBTB3-205ENST00000504949 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
RHOBTB3-205ENST00000504949 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
RHOBTB3-205ENST00000504949 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
RHOBTB3-205ENST00000504949 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.03
RHOBTB3-205ENST00000504949 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
RHOBTB3-205ENST00000504949 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
RHOBTB3-205ENST00000504949 WIZO95785 1651 aa21.46■■□□□ 1.03
RHOBTB3-205ENST00000504949 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
RHOBTB3-205ENST00000504949 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
RHOBTB3-205ENST00000504949 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
RHOBTB3-205ENST00000504949 HMGXB3Q12766 1538 aa21.33■■□□□ 1
RHOBTB3-205ENST00000504949 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
RHOBTB3-205ENST00000504949 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
RHOBTB3-205ENST00000504949 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
RHOBTB3-205ENST00000504949 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
RHOBTB3-205ENST00000504949 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
RHOBTB3-205ENST00000504949 CFTRP13569 1480 aa20.79■□□□□ 0.92
RHOBTB3-205ENST00000504949 NESP48681 1621 aa20.76■□□□□ 0.91
RHOBTB3-205ENST00000504949 LAMC3Q9Y6N6 1575 aa20.74■□□□□ 0.91
RHOBTB3-205ENST00000504949 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
RHOBTB3-205ENST00000504949 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
RHOBTB3-205ENST00000504949 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
RHOBTB3-205ENST00000504949 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
RHOBTB3-205ENST00000504949 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
RHOBTB3-205ENST00000504949 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
RHOBTB3-205ENST00000504949 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
RHOBTB3-205ENST00000504949 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
RHOBTB3-205ENST00000504949 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
RHOBTB3-205ENST00000504949 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
RHOBTB3-205ENST00000504949 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
RHOBTB3-205ENST00000504949 CUX1P39880 1505 aa20.31■□□□□ 0.84
RHOBTB3-205ENST00000504949 WDR62O43379 1518 aa20.29■□□□□ 0.84
RHOBTB3-205ENST00000504949 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
RHOBTB3-205ENST00000504949 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
RHOBTB3-205ENST00000504949 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
RHOBTB3-205ENST00000504949 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
RHOBTB3-205ENST00000504949 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
RHOBTB3-205ENST00000504949 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
RHOBTB3-205ENST00000504949 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
RHOBTB3-205ENST00000504949 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
RHOBTB3-205ENST00000504949 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
RHOBTB3-205ENST00000504949 CUX2O14529 1486 aa20.11■□□□□ 0.81
RHOBTB3-205ENST00000504949 SOGA1O94964 1423 aa20.07■□□□□ 0.8
RHOBTB3-205ENST00000504949 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
RHOBTB3-205ENST00000504949 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
RHOBTB3-205ENST00000504949 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
RHOBTB3-205ENST00000504949 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
RHOBTB3-205ENST00000504949 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
RHOBTB3-205ENST00000504949 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
RHOBTB3-205ENST00000504949 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
RHOBTB3-205ENST00000504949 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
RHOBTB3-205ENST00000504949 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.772e-7■■■■■ 27.3
RHOBTB3-205ENST00000504949 KIF27Q86VH2 1401 aa19.87■□□□□ 0.77
RHOBTB3-205ENST00000504949 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
RHOBTB3-205ENST00000504949 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
RHOBTB3-205ENST00000504949 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
RHOBTB3-205ENST00000504949 EEA1Q15075 1411 aa19.79■□□□□ 0.76
RHOBTB3-205ENST00000504949 IGF1RP08069 1367 aa19.78■□□□□ 0.76
RHOBTB3-205ENST00000504949 GRIN2BQ13224 1484 aa19.77■□□□□ 0.75
RHOBTB3-205ENST00000504949 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
RHOBTB3-205ENST00000504949 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
RHOBTB3-205ENST00000504949 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
RHOBTB3-205ENST00000504949 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
RHOBTB3-205ENST00000504949 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
RHOBTB3-205ENST00000504949 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
RHOBTB3-205ENST00000504949 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
RHOBTB3-205ENST00000504949 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
RHOBTB3-205ENST00000504949 CUL7Q14999 1698 aa19.63■□□□□ 0.73
RHOBTB3-205ENST00000504949 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
RHOBTB3-205ENST00000504949 ADAMTS12P58397 1594 aa19.63■□□□□ 0.73
RHOBTB3-205ENST00000504949 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
RHOBTB3-205ENST00000504949 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
RHOBTB3-205ENST00000504949 KIF21BO75037 1637 aa19.56■□□□□ 0.72
RHOBTB3-205ENST00000504949 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
RHOBTB3-205ENST00000504949 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
RHOBTB3-205ENST00000504949 FBLN2P98095 1184 aa19.5■□□□□ 0.71
RHOBTB3-205ENST00000504949 CHD1O14646 1710 aa19.48■□□□□ 0.71
RHOBTB3-205ENST00000504949 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
RHOBTB3-205ENST00000504949 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
RHOBTB3-205ENST00000504949 NUP160Q12769 1436 aa19.43■□□□□ 0.7
RHOBTB3-205ENST00000504949 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
RHOBTB3-205ENST00000504949 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms