RNA–Protein interactions for RNA: ENST00000504743.1

ZFYVE28-203, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 4

Gene ZFYVE28, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-203ENST00000504743 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
ZFYVE28-203ENST00000504743 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
ZFYVE28-203ENST00000504743 ABCC9O60706 1549 aa29.53■■■□□ 2.32
ZFYVE28-203ENST00000504743 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
ZFYVE28-203ENST00000504743 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
ZFYVE28-203ENST00000504743 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
ZFYVE28-203ENST00000504743 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
ZFYVE28-203ENST00000504743 NACADO15069 1562 aa28.36■■■□□ 2.13
ZFYVE28-203ENST00000504743 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
ZFYVE28-203ENST00000504743 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
ZFYVE28-203ENST00000504743 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.01
ZFYVE28-203ENST00000504743 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
ZFYVE28-203ENST00000504743 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
ZFYVE28-203ENST00000504743 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
ZFYVE28-203ENST00000504743 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
ZFYVE28-203ENST00000504743 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
ZFYVE28-203ENST00000504743 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
ZFYVE28-203ENST00000504743 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
ZFYVE28-203ENST00000504743 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
ZFYVE28-203ENST00000504743 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
ZFYVE28-203ENST00000504743 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
ZFYVE28-203ENST00000504743 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
ZFYVE28-203ENST00000504743 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
ZFYVE28-203ENST00000504743 WIZO95785 1651 aa26.26■■□□□ 1.79
ZFYVE28-203ENST00000504743 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
ZFYVE28-203ENST00000504743 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
ZFYVE28-203ENST00000504743 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
ZFYVE28-203ENST00000504743 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
ZFYVE28-203ENST00000504743 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
ZFYVE28-203ENST00000504743 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
ZFYVE28-203ENST00000504743 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
ZFYVE28-203ENST00000504743 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
ZFYVE28-203ENST00000504743 NESP48681 1621 aa25.54■■□□□ 1.68
ZFYVE28-203ENST00000504743 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
ZFYVE28-203ENST00000504743 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
ZFYVE28-203ENST00000504743 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
ZFYVE28-203ENST00000504743 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
ZFYVE28-203ENST00000504743 CFTRP13569 1480 aa25.31■■□□□ 1.64
ZFYVE28-203ENST00000504743 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
ZFYVE28-203ENST00000504743 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
ZFYVE28-203ENST00000504743 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
ZFYVE28-203ENST00000504743 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
ZFYVE28-203ENST00000504743 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
ZFYVE28-203ENST00000504743 CUX2O14529 1486 aa25.12■■□□□ 1.61
ZFYVE28-203ENST00000504743 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
ZFYVE28-203ENST00000504743 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
ZFYVE28-203ENST00000504743 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
ZFYVE28-203ENST00000504743 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
ZFYVE28-203ENST00000504743 WDR62O43379 1518 aa24.93■■□□□ 1.58
ZFYVE28-203ENST00000504743 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
ZFYVE28-203ENST00000504743 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
ZFYVE28-203ENST00000504743 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
ZFYVE28-203ENST00000504743 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
ZFYVE28-203ENST00000504743 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.56
ZFYVE28-203ENST00000504743 CUX1P39880 1505 aa24.82■■□□□ 1.56
ZFYVE28-203ENST00000504743 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
ZFYVE28-203ENST00000504743 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
ZFYVE28-203ENST00000504743 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
ZFYVE28-203ENST00000504743 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
ZFYVE28-203ENST00000504743 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
ZFYVE28-203ENST00000504743 SOGA1O94964 1423 aa24.49■■□□□ 1.51
ZFYVE28-203ENST00000504743 EEA1Q15075 1411 aa24.46■■□□□ 1.51
ZFYVE28-203ENST00000504743 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
ZFYVE28-203ENST00000504743 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
ZFYVE28-203ENST00000504743 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
ZFYVE28-203ENST00000504743 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
ZFYVE28-203ENST00000504743 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
ZFYVE28-203ENST00000504743 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
ZFYVE28-203ENST00000504743 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
ZFYVE28-203ENST00000504743 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
ZFYVE28-203ENST00000504743 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
ZFYVE28-203ENST00000504743 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.493e-8■□□□□ 9.7
ZFYVE28-203ENST00000504743 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
ZFYVE28-203ENST00000504743 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
ZFYVE28-203ENST00000504743 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
ZFYVE28-203ENST00000504743 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
ZFYVE28-203ENST00000504743 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
ZFYVE28-203ENST00000504743 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
ZFYVE28-203ENST00000504743 KIF21BO75037 1637 aa24.17■■□□□ 1.46
ZFYVE28-203ENST00000504743 IGF1RP08069 1367 aa24.16■■□□□ 1.46
ZFYVE28-203ENST00000504743 FBLN2P98095 1184 aa24.15■■□□□ 1.46
ZFYVE28-203ENST00000504743 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
ZFYVE28-203ENST00000504743 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
ZFYVE28-203ENST00000504743 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
ZFYVE28-203ENST00000504743 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
ZFYVE28-203ENST00000504743 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
ZFYVE28-203ENST00000504743 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
ZFYVE28-203ENST00000504743 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
ZFYVE28-203ENST00000504743 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
ZFYVE28-203ENST00000504743 CUL7Q14999 1698 aa24.07■■□□□ 1.44
ZFYVE28-203ENST00000504743 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
ZFYVE28-203ENST00000504743 CHD1O14646 1710 aa24.04■■□□□ 1.44
ZFYVE28-203ENST00000504743 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
ZFYVE28-203ENST00000504743 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
ZFYVE28-203ENST00000504743 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
ZFYVE28-203ENST00000504743 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
ZFYVE28-203ENST00000504743 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
ZFYVE28-203ENST00000504743 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
ZFYVE28-203ENST00000504743 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
ZFYVE28-203ENST00000504743 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms