RNA–Protein interactions for RNA: ENST00000504494.1

AC027343.3-201, humanhuman

TSL 4 BASIC

Gene AC027343.3, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027343.3-201ENST00000504494 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
AC027343.3-201ENST00000504494 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
AC027343.3-201ENST00000504494 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
AC027343.3-201ENST00000504494 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
AC027343.3-201ENST00000504494 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
AC027343.3-201ENST00000504494 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
AC027343.3-201ENST00000504494 FOXD1Q16676 465 aa18.38■□□□□ 0.53
AC027343.3-201ENST00000504494 ABCC9O60706 1549 aa18.1■□□□□ 0.49
AC027343.3-201ENST00000504494 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
AC027343.3-201ENST00000504494 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
AC027343.3-201ENST00000504494 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
AC027343.3-201ENST00000504494 NACADO15069 1562 aa17.4■□□□□ 0.38
AC027343.3-201ENST00000504494 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
AC027343.3-201ENST00000504494 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
AC027343.3-201ENST00000504494 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
AC027343.3-201ENST00000504494 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
AC027343.3-201ENST00000504494 MSH5O43196 834 aa17.23■□□□□ 0.35
AC027343.3-201ENST00000504494 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
AC027343.3-201ENST00000504494 ADRA2BP18089 450 aa17.17■□□□□ 0.34
AC027343.3-201ENST00000504494 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
AC027343.3-201ENST00000504494 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
AC027343.3-201ENST00000504494 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
AC027343.3-201ENST00000504494 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
AC027343.3-201ENST00000504494 BICRAQ9NZM4 1560 aa16.89■□□□□ 0.3
AC027343.3-201ENST00000504494 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
AC027343.3-201ENST00000504494 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
AC027343.3-201ENST00000504494 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
AC027343.3-201ENST00000504494 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
AC027343.3-201ENST00000504494 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
AC027343.3-201ENST00000504494 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
AC027343.3-201ENST00000504494 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
AC027343.3-201ENST00000504494 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
AC027343.3-201ENST00000504494 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.19
AC027343.3-201ENST00000504494 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
AC027343.3-201ENST00000504494 WIZO95785 1651 aa16.2■□□□□ 0.18
AC027343.3-201ENST00000504494 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
AC027343.3-201ENST00000504494 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
AC027343.3-201ENST00000504494 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
AC027343.3-201ENST00000504494 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
AC027343.3-201ENST00000504494 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
AC027343.3-201ENST00000504494 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
AC027343.3-201ENST00000504494 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
AC027343.3-201ENST00000504494 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
AC027343.3-201ENST00000504494 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
AC027343.3-201ENST00000504494 NESP48681 1621 aa15.76■□□□□ 0.11
AC027343.3-201ENST00000504494 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
AC027343.3-201ENST00000504494 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
AC027343.3-201ENST00000504494 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
AC027343.3-201ENST00000504494 CFTRP13569 1480 aa15.62■□□□□ 0.09
AC027343.3-201ENST00000504494 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
AC027343.3-201ENST00000504494 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
AC027343.3-201ENST00000504494 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
AC027343.3-201ENST00000504494 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
AC027343.3-201ENST00000504494 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
AC027343.3-201ENST00000504494 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
AC027343.3-201ENST00000504494 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
AC027343.3-201ENST00000504494 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
AC027343.3-201ENST00000504494 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
AC027343.3-201ENST00000504494 MRC2Q9UBG0 1479 aa15.37■□□□□ 0.05
AC027343.3-201ENST00000504494 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
AC027343.3-201ENST00000504494 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
AC027343.3-201ENST00000504494 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
AC027343.3-201ENST00000504494 CUX1P39880 1505 aa15.32■□□□□ 0.04
AC027343.3-201ENST00000504494 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
AC027343.3-201ENST00000504494 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
AC027343.3-201ENST00000504494 WDR62O43379 1518 aa15.27■□□□□ 0.04
AC027343.3-201ENST00000504494 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
AC027343.3-201ENST00000504494 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
AC027343.3-201ENST00000504494 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
AC027343.3-201ENST00000504494 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
AC027343.3-201ENST00000504494 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
AC027343.3-201ENST00000504494 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
AC027343.3-201ENST00000504494 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
AC027343.3-201ENST00000504494 CUX2O14529 1486 aa15.17■□□□□ 0.02
AC027343.3-201ENST00000504494 SOGA1O94964 1423 aa15.16■□□□□ 0.02
AC027343.3-201ENST00000504494 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
AC027343.3-201ENST00000504494 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
AC027343.3-201ENST00000504494 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
AC027343.3-201ENST00000504494 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
AC027343.3-201ENST00000504494 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
AC027343.3-201ENST00000504494 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
AC027343.3-201ENST00000504494 FAM9AQ8IZU1 332 aaPredicted RBP15.07■□□□□ 0
AC027343.3-201ENST00000504494 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 0
AC027343.3-201ENST00000504494 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
AC027343.3-201ENST00000504494 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
AC027343.3-201ENST00000504494 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
AC027343.3-201ENST00000504494 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
AC027343.3-201ENST00000504494 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
AC027343.3-201ENST00000504494 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
AC027343.3-201ENST00000504494 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
AC027343.3-201ENST00000504494 KIF27Q86VH2 1401 aa14.96□□□□□ -0.01
AC027343.3-201ENST00000504494 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
AC027343.3-201ENST00000504494 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
AC027343.3-201ENST00000504494 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
AC027343.3-201ENST00000504494 FBLN2P98095 1184 aa14.9□□□□□ -0.02
AC027343.3-201ENST00000504494 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
AC027343.3-201ENST00000504494 IGF1RP08069 1367 aa14.89□□□□□ -0.03
AC027343.3-201ENST00000504494 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
AC027343.3-201ENST00000504494 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
AC027343.3-201ENST00000504494 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms