RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 NISCHQ9Y2I1 1504 aa43.31■■■■■ 4.52
DDR1-252ENST00000504152 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
DDR1-252ENST00000504152 ABCC9O60706 1549 aa37.27■■■■□ 3.56
DDR1-252ENST00000504152 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
DDR1-252ENST00000504152 ZCCHC6Q5VYS8 1495 aaKnown RBP36.1■■■■□ 3.37
DDR1-252ENST00000504152 NACADO15069 1562 aa35.99■■■■□ 3.35
DDR1-252ENST00000504152 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.35
DDR1-252ENST00000504152 MYO15BQ96JP2 1530 aa35.87■■■■□ 3.33
DDR1-252ENST00000504152 DCAF1Q9Y4B6 1507 aa35.83■■■■□ 3.33
DDR1-252ENST00000504152 UNC13AQ9UPW8 1703 aa35.07■■■■□ 3.2
DDR1-252ENST00000504152 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
DDR1-252ENST00000504152 DNAJC5BQ9UF47 199 aa34.98■■■■□ 3.19
DDR1-252ENST00000504152 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.18
DDR1-252ENST00000504152 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
DDR1-252ENST00000504152 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
DDR1-252ENST00000504152 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
DDR1-252ENST00000504152 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
DDR1-252ENST00000504152 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
DDR1-252ENST00000504152 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
DDR1-252ENST00000504152 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
DDR1-252ENST00000504152 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
DDR1-252ENST00000504152 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
DDR1-252ENST00000504152 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
DDR1-252ENST00000504152 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
DDR1-252ENST00000504152 PEG3Q9GZU2 1588 aa33.16■■■□□ 2.9
DDR1-252ENST00000504152 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
DDR1-252ENST00000504152 WIZO95785 1651 aa33.04■■■□□ 2.88
DDR1-252ENST00000504152 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
DDR1-252ENST00000504152 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
DDR1-252ENST00000504152 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
DDR1-252ENST00000504152 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
DDR1-252ENST00000504152 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
DDR1-252ENST00000504152 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
DDR1-252ENST00000504152 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
DDR1-252ENST00000504152 NESP48681 1621 aa32.28■■■□□ 2.76
DDR1-252ENST00000504152 LAMC3Q9Y6N6 1575 aa32.27■■■□□ 2.76
DDR1-252ENST00000504152 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
DDR1-252ENST00000504152 CFTRP13569 1480 aa32.13■■■□□ 2.73
DDR1-252ENST00000504152 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
DDR1-252ENST00000504152 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
DDR1-252ENST00000504152 KIF21AQ7Z4S6 1674 aa31.88■■■□□ 2.69
DDR1-252ENST00000504152 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
DDR1-252ENST00000504152 CUX2O14529 1486 aa31.83■■■□□ 2.69
DDR1-252ENST00000504152 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.68
DDR1-252ENST00000504152 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
DDR1-252ENST00000504152 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
DDR1-252ENST00000504152 WDR62O43379 1518 aa31.53■■■□□ 2.64
DDR1-252ENST00000504152 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
DDR1-252ENST00000504152 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
DDR1-252ENST00000504152 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
DDR1-252ENST00000504152 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.61
DDR1-252ENST00000504152 CUX1P39880 1505 aa31.28■■■□□ 2.6
DDR1-252ENST00000504152 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
DDR1-252ENST00000504152 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
DDR1-252ENST00000504152 IFT140Q96RY7 1462 aa31.14■■■□□ 2.58
DDR1-252ENST00000504152 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.57
DDR1-252ENST00000504152 SOGA1O94964 1423 aa31.12■■■□□ 2.57
DDR1-252ENST00000504152 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
DDR1-252ENST00000504152 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
DDR1-252ENST00000504152 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
DDR1-252ENST00000504152 RAD54L2Q9Y4B4 1467 aa31.04■■■□□ 2.56
DDR1-252ENST00000504152 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
DDR1-252ENST00000504152 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
DDR1-252ENST00000504152 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
DDR1-252ENST00000504152 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
DDR1-252ENST00000504152 AQRO60306 1485 aaKnown RBP eCLIP30.87■■■□□ 2.534e-7■■■■■ 28.2
DDR1-252ENST00000504152 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
DDR1-252ENST00000504152 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
DDR1-252ENST00000504152 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
DDR1-252ENST00000504152 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
DDR1-252ENST00000504152 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
DDR1-252ENST00000504152 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
DDR1-252ENST00000504152 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
DDR1-252ENST00000504152 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
DDR1-252ENST00000504152 PBRM1Q86U86 1689 aa30.56■■■□□ 2.48
DDR1-252ENST00000504152 SNAPC4Q5SXM2 1469 aa30.54■■■□□ 2.48
DDR1-252ENST00000504152 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
DDR1-252ENST00000504152 FBLN2P98095 1184 aa30.53■■■□□ 2.48
DDR1-252ENST00000504152 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
DDR1-252ENST00000504152 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
DDR1-252ENST00000504152 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
DDR1-252ENST00000504152 IGF1RP08069 1367 aa30.45■■■□□ 2.47
DDR1-252ENST00000504152 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
DDR1-252ENST00000504152 RUSC2Q8N2Y8 1516 aa30.39■■■□□ 2.46
DDR1-252ENST00000504152 FHAD1B1AJZ9 1412 aa30.39■■■□□ 2.45
DDR1-252ENST00000504152 CHD1O14646 1710 aa30.36■■■□□ 2.45
DDR1-252ENST00000504152 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
DDR1-252ENST00000504152 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
DDR1-252ENST00000504152 CUL7Q14999 1698 aa30.27■■■□□ 2.44
DDR1-252ENST00000504152 EEA1Q15075 1411 aa30.25■■■□□ 2.43
DDR1-252ENST00000504152 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
DDR1-252ENST00000504152 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
DDR1-252ENST00000504152 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
DDR1-252ENST00000504152 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
DDR1-252ENST00000504152 NUP160Q12769 1436 aa30.08■■■□□ 2.41
DDR1-252ENST00000504152 RIMBP3CA6NJZ7 1639 aa30.05■■■□□ 2.4
DDR1-252ENST00000504152 RIMBP3BA6NNM3 1639 aa30.05■■■□□ 2.4
DDR1-252ENST00000504152 RIMBP3Q9UFD9 1639 aa30.05■■■□□ 2.4
DDR1-252ENST00000504152 PRXQ9BXM0 1461 aa30.05■■■□□ 2.4
DDR1-252ENST00000504152 CEP170Q5SW79 1584 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms