RNA–Protein interactions for RNA: ENST00000503932.5

CDV3-204, Transcript of CDV3 homolog, humanhuman

TSL 4

Gene CDV3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-204ENST00000503932 NISCHQ9Y2I1 1504 aa53.12■■■■■ 6.09
CDV3-204ENST00000503932 CCDC180Q9P1Z9 1646 aa47.5■■■■■ 5.19
CDV3-204ENST00000503932 ABCC9O60706 1549 aa47.11■■■■■ 5.13
CDV3-204ENST00000503932 RB1CC1Q8TDY2 1594 aa45.02■■■■■ 4.8
CDV3-204ENST00000503932 NACADO15069 1562 aa44.81■■■■■ 4.76
CDV3-204ENST00000503932 DCAF8L2P0C7V8 631 aa44.62■■■■■ 4.73
CDV3-204ENST00000503932 MYO15BQ96JP2 1530 aa44.33■■■■■ 4.69
CDV3-204ENST00000503932 ZCCHC6Q5VYS8 1495 aaKnown RBP44.13■■■■■ 4.65
CDV3-204ENST00000503932 UNC13AQ9UPW8 1703 aa43.99■■■■■ 4.63
CDV3-204ENST00000503932 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
CDV3-204ENST00000503932 PABPN1Q86U42 306 aaKnown RBP eCLIP43.91■■■■■ 4.62
CDV3-204ENST00000503932 DNAJC5BQ9UF47 199 aa43.81■■■■■ 4.6
CDV3-204ENST00000503932 BICRAQ9NZM4 1560 aa43.7■■■■■ 4.59
CDV3-204ENST00000503932 SCRIBQ14160 1630 aa43.32■■■■■ 4.53
CDV3-204ENST00000503932 SHROOM4Q9ULL8 1493 aa43.17■■■■■ 4.5
CDV3-204ENST00000503932 EIF4G1Q04637 1599 aaKnown RBP42.6■■■■■ 4.41
CDV3-204ENST00000503932 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
CDV3-204ENST00000503932 CECR2Q9BXF3 1484 aa42.4■■■■■ 4.38
CDV3-204ENST00000503932 SMARCA4P51532 1647 aa41.36■■■■■ 4.21
CDV3-204ENST00000503932 NCAPD3P42695 1498 aa41.35■■■■■ 4.21
CDV3-204ENST00000503932 ATAD2BQ9ULI0 1458 aa41.29■■■■■ 4.2
CDV3-204ENST00000503932 BAZ1AQ9NRL2 1556 aaPredicted RBP41.21■■■■■ 4.19
CDV3-204ENST00000503932 SMARCA2P51531 1590 aa41.2■■■■■ 4.19
CDV3-204ENST00000503932 HMGXB3Q12766 1538 aa41.1■■■■■ 4.17
CDV3-204ENST00000503932 PEG3Q9GZU2 1588 aa40.96■■■■■ 4.15
CDV3-204ENST00000503932 MROH2BQ7Z745 1585 aa40.94■■■■■ 4.14
CDV3-204ENST00000503932 BAZ1BQ9UIG0 1483 aaKnown RBP40.92■■■■■ 4.14
CDV3-204ENST00000503932 ERCC6Q03468 1493 aa40.65■■■■■ 4.1
CDV3-204ENST00000503932 NESP48681 1621 aa40.59■■■■■ 4.09
CDV3-204ENST00000503932 WIZO95785 1651 aa40.46■■■■■ 4.07
CDV3-204ENST00000503932 CUX2O14529 1486 aa40.44■■■■■ 4.06
CDV3-204ENST00000503932 LAMC3Q9Y6N6 1575 aa40.36■■■■■ 4.05
CDV3-204ENST00000503932 RSF1Q96T23 1441 aaPredicted RBP40.24■■■■■ 4.03
CDV3-204ENST00000503932 CADPSQ9ULU8 1353 aa40.11■■■■■ 4.01
CDV3-204ENST00000503932 THOC2Q8NI27 1593 aaKnown RBP40.11■■■■■ 4.01
CDV3-204ENST00000503932 PDS5BQ9NTI5 1447 aa40.11■■■■■ 4.01
CDV3-204ENST00000503932 KIF21AQ7Z4S6 1674 aa40.08■■■■■ 4.01
CDV3-204ENST00000503932 TOP2AP11388 1531 aaKnown RBP40■■■■□ 3.99
CDV3-204ENST00000503932 DNAJC5Q9H3Z4 198 aa39.94■■■■□ 3.98
CDV3-204ENST00000503932 MRC2Q9UBG0 1479 aa39.76■■■■□ 3.96
CDV3-204ENST00000503932 CFTRP13569 1480 aa39.75■■■■□ 3.95
CDV3-204ENST00000503932 CEP164Q9UPV0 1460 aa39.68■■■■□ 3.94
CDV3-204ENST00000503932 FANCD2Q9BXW9 1451 aa39.68■■■■□ 3.94
CDV3-204ENST00000503932 WDR62O43379 1518 aa39.65■■■■□ 3.94
CDV3-204ENST00000503932 CCDC88BA6NC98 1476 aa39.52■■■■□ 3.92
CDV3-204ENST00000503932 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
CDV3-204ENST00000503932 URB2Q14146 1524 aaKnown RBP39.33■■■■□ 3.89
CDV3-204ENST00000503932 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
CDV3-204ENST00000503932 ABCC8Q09428 1581 aa38.9■■■■□ 3.82
CDV3-204ENST00000503932 IFT140Q96RY7 1462 aa38.88■■■■□ 3.81
CDV3-204ENST00000503932 DNMBPQ6XZF7 1577 aa38.87■■■■□ 3.81
CDV3-204ENST00000503932 ZNF608Q9ULD9 1512 aaPredicted RBP38.78■■■■□ 3.8
CDV3-204ENST00000503932 SUPT5HO00267 1087 aaKnown RBP38.73■■■■□ 3.79
CDV3-204ENST00000503932 OSCARQ8IYS5 282 aa38.63■■■■□ 3.77
CDV3-204ENST00000503932 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
CDV3-204ENST00000503932 TARBP1Q13395 1621 aaKnown RBP38.6■■■■□ 3.77
CDV3-204ENST00000503932 EIF4G3O43432 1585 aaKnown RBP38.59■■■■□ 3.77
CDV3-204ENST00000503932 AQRO60306 1485 aaKnown RBP eCLIP38.46■■■■□ 3.752e-11■■■□□ 16.1
CDV3-204ENST00000503932 CUX1P39880 1505 aa38.45■■■■□ 3.75
CDV3-204ENST00000503932 RAD54L2Q9Y4B4 1467 aa38.44■■■■□ 3.74
CDV3-204ENST00000503932 FGD5Q6ZNL6 1462 aa38.41■■■■□ 3.74
CDV3-204ENST00000503932 SOGA1O94964 1423 aa38.41■■■■□ 3.74
CDV3-204ENST00000503932 TRIM41Q8WV44 630 aa38.36■■■■□ 3.73
CDV3-204ENST00000503932 TDRD9Q8NDG6 1382 aaKnown RBP38.29■■■■□ 3.72
CDV3-204ENST00000503932 WDR97A6NE52 1622 aa38.23■■■■□ 3.71
CDV3-204ENST00000503932 CHD1O14646 1710 aa38.21■■■■□ 3.71
CDV3-204ENST00000503932 RIMBP3CA6NJZ7 1639 aa38.12■■■■□ 3.69
CDV3-204ENST00000503932 RIMBP3BA6NNM3 1639 aa38.12■■■■□ 3.69
CDV3-204ENST00000503932 RIMBP3Q9UFD9 1639 aa38.12■■■■□ 3.69
CDV3-204ENST00000503932 FBLN2P98095 1184 aa38.11■■■■□ 3.69
CDV3-204ENST00000503932 SNAPC4Q5SXM2 1469 aa38.1■■■■□ 3.69
CDV3-204ENST00000503932 GRIN2BQ13224 1484 aa38.05■■■■□ 3.68
CDV3-204ENST00000503932 ARHGEF11O15085 1522 aa38.05■■■■□ 3.68
CDV3-204ENST00000503932 MAGI1Q96QZ7 1491 aaPredicted RBP38.02■■■■□ 3.68
CDV3-204ENST00000503932 ABCA10Q8WWZ4 1543 aa38■■■■□ 3.67
CDV3-204ENST00000503932 GAPVD1Q14C86 1478 aa37.96■■■■□ 3.67
CDV3-204ENST00000503932 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
CDV3-204ENST00000503932 TOP2BQ02880 1626 aa37.94■■■■□ 3.66
CDV3-204ENST00000503932 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
CDV3-204ENST00000503932 PBRM1Q86U86 1689 aa37.92■■■■□ 3.66
CDV3-204ENST00000503932 ABCA5Q8WWZ7 1642 aa37.92■■■■□ 3.66
CDV3-204ENST00000503932 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
CDV3-204ENST00000503932 CHMP7Q8WUX9 453 aaPredicted RBP37.9■■■■□ 3.66
CDV3-204ENST00000503932 SYNJ2O15056 1496 aa37.88■■■■□ 3.65
CDV3-204ENST00000503932 CLASP1Q7Z460 1538 aa37.8■■■■□ 3.64
CDV3-204ENST00000503932 ARAP1Q96P48 1450 aa37.71■■■■□ 3.63
CDV3-204ENST00000503932 CYB5RLQ6IPT4 315 aa37.7■■■■□ 3.63
CDV3-204ENST00000503932 ADAMTS12P58397 1594 aa37.61■■■■□ 3.61
CDV3-204ENST00000503932 GRIN2AQ12879 1464 aa37.57■■■■□ 3.6
CDV3-204ENST00000503932 ERICH3Q5RHP9 1530 aa37.53■■■■□ 3.6
CDV3-204ENST00000503932 FHAD1B1AJZ9 1412 aa37.51■■■■□ 3.59
CDV3-204ENST00000503932 NUP160Q12769 1436 aa37.43■■■■□ 3.58
CDV3-204ENST00000503932 CEP170Q5SW79 1584 aa37.42■■■■□ 3.58
CDV3-204ENST00000503932 ERCC6L2Q5T890 1561 aa37.23■■■■□ 3.55
CDV3-204ENST00000503932 SHROOM2Q13796 1616 aa37.21■■■■□ 3.55
CDV3-204ENST00000503932 KIF27Q86VH2 1401 aa37.2■■■■□ 3.55
CDV3-204ENST00000503932 TRHP20396 242 aaPredicted RBP37.15■■■■□ 3.54
CDV3-204ENST00000503932 IGF1RP08069 1367 aa37.13■■■■□ 3.53
CDV3-204ENST00000503932 RUSC2Q8N2Y8 1516 aa37.07■■■■□ 3.53
CDV3-204ENST00000503932 CUL7Q14999 1698 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms