RNA–Protein interactions for RNA: ENST00000503672.1

PRKCZ-225, Transcript of protein kinase C zeta, humanhuman

TSL 1 (best)

Gene PRKCZ, Length 1,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-225ENST00000503672 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
PRKCZ-225ENST00000503672 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
PRKCZ-225ENST00000503672 ABCC9O60706 1549 aa24.15■■□□□ 1.46
PRKCZ-225ENST00000503672 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
PRKCZ-225ENST00000503672 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
PRKCZ-225ENST00000503672 NACADO15069 1562 aa23.48■■□□□ 1.35
PRKCZ-225ENST00000503672 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
PRKCZ-225ENST00000503672 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
PRKCZ-225ENST00000503672 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
PRKCZ-225ENST00000503672 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
PRKCZ-225ENST00000503672 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
PRKCZ-225ENST00000503672 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
PRKCZ-225ENST00000503672 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
PRKCZ-225ENST00000503672 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
PRKCZ-225ENST00000503672 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
PRKCZ-225ENST00000503672 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
PRKCZ-225ENST00000503672 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
PRKCZ-225ENST00000503672 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
PRKCZ-225ENST00000503672 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
PRKCZ-225ENST00000503672 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
PRKCZ-225ENST00000503672 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
PRKCZ-225ENST00000503672 WIZO95785 1651 aa21.75■■□□□ 1.07
PRKCZ-225ENST00000503672 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
PRKCZ-225ENST00000503672 DNAJC5BQ9UF47 199 aa21.71■■□□□ 1.07
PRKCZ-225ENST00000503672 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
PRKCZ-225ENST00000503672 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
PRKCZ-225ENST00000503672 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
PRKCZ-225ENST00000503672 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
PRKCZ-225ENST00000503672 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
PRKCZ-225ENST00000503672 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
PRKCZ-225ENST00000503672 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
PRKCZ-225ENST00000503672 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
PRKCZ-225ENST00000503672 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
PRKCZ-225ENST00000503672 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
PRKCZ-225ENST00000503672 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
PRKCZ-225ENST00000503672 NESP48681 1621 aa21■□□□□ 0.95
PRKCZ-225ENST00000503672 CFTRP13569 1480 aa20.96■□□□□ 0.95
PRKCZ-225ENST00000503672 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
PRKCZ-225ENST00000503672 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
PRKCZ-225ENST00000503672 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
PRKCZ-225ENST00000503672 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
PRKCZ-225ENST00000503672 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
PRKCZ-225ENST00000503672 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
PRKCZ-225ENST00000503672 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
PRKCZ-225ENST00000503672 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
PRKCZ-225ENST00000503672 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
PRKCZ-225ENST00000503672 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
PRKCZ-225ENST00000503672 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
PRKCZ-225ENST00000503672 WDR62O43379 1518 aa20.53■□□□□ 0.88
PRKCZ-225ENST00000503672 TOPBP1Q92547 1522 aa20.52■□□□□ 0.87
PRKCZ-225ENST00000503672 CUX1P39880 1505 aa20.51■□□□□ 0.87
PRKCZ-225ENST00000503672 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
PRKCZ-225ENST00000503672 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
PRKCZ-225ENST00000503672 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
PRKCZ-225ENST00000503672 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
PRKCZ-225ENST00000503672 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
PRKCZ-225ENST00000503672 CUX2O14529 1486 aa20.38■□□□□ 0.85
PRKCZ-225ENST00000503672 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
PRKCZ-225ENST00000503672 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
PRKCZ-225ENST00000503672 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
PRKCZ-225ENST00000503672 SOGA1O94964 1423 aa20.31■□□□□ 0.84
PRKCZ-225ENST00000503672 IFT140Q96RY7 1462 aa20.28■□□□□ 0.84
PRKCZ-225ENST00000503672 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
PRKCZ-225ENST00000503672 TARBP1Q13395 1621 aaKnown RBP20.26■□□□□ 0.83
PRKCZ-225ENST00000503672 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
PRKCZ-225ENST00000503672 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
PRKCZ-225ENST00000503672 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
PRKCZ-225ENST00000503672 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
PRKCZ-225ENST00000503672 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
PRKCZ-225ENST00000503672 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
PRKCZ-225ENST00000503672 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
PRKCZ-225ENST00000503672 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
PRKCZ-225ENST00000503672 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
PRKCZ-225ENST00000503672 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
PRKCZ-225ENST00000503672 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
PRKCZ-225ENST00000503672 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
PRKCZ-225ENST00000503672 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
PRKCZ-225ENST00000503672 EEA1Q15075 1411 aa19.98■□□□□ 0.79
PRKCZ-225ENST00000503672 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
PRKCZ-225ENST00000503672 CUL7Q14999 1698 aa19.94■□□□□ 0.78
PRKCZ-225ENST00000503672 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
PRKCZ-225ENST00000503672 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
PRKCZ-225ENST00000503672 IGF1RP08069 1367 aa19.91■□□□□ 0.78
PRKCZ-225ENST00000503672 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
PRKCZ-225ENST00000503672 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
PRKCZ-225ENST00000503672 CHD1O14646 1710 aa19.88■□□□□ 0.77
PRKCZ-225ENST00000503672 FBLN2P98095 1184 aa19.87■□□□□ 0.77
PRKCZ-225ENST00000503672 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
PRKCZ-225ENST00000503672 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
PRKCZ-225ENST00000503672 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
PRKCZ-225ENST00000503672 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
PRKCZ-225ENST00000503672 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
PRKCZ-225ENST00000503672 KIF21BO75037 1637 aa19.76■□□□□ 0.75
PRKCZ-225ENST00000503672 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
PRKCZ-225ENST00000503672 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
PRKCZ-225ENST00000503672 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
PRKCZ-225ENST00000503672 CTTNBP2Q8WZ74 1663 aa19.68■□□□□ 0.74
PRKCZ-225ENST00000503672 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
PRKCZ-225ENST00000503672 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
PRKCZ-225ENST00000503672 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms