RNA–Protein interactions for RNA: ENST00000503646.1

TNFAIP8-204, Transcript of TNF alpha induced protein 8, humanhuman

TSL 2 BASIC

Gene TNFAIP8, Length 2,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-204ENST00000503646 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
TNFAIP8-204ENST00000503646 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
TNFAIP8-204ENST00000503646 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
TNFAIP8-204ENST00000503646 HRCP23327 699 aa13.68□□□□□ -0.22
TNFAIP8-204ENST00000503646 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
TNFAIP8-204ENST00000503646 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
TNFAIP8-204ENST00000503646 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
TNFAIP8-204ENST00000503646 PCGF6Q9BYE7 350 aa13.3□□□□□ -0.28
TNFAIP8-204ENST00000503646 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
TNFAIP8-204ENST00000503646 MYT1Q01538 1121 aa13.13□□□□□ -0.31
TNFAIP8-204ENST00000503646 SHROOM4Q9ULL8 1493 aa13.12□□□□□ -0.31
TNFAIP8-204ENST00000503646 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
TNFAIP8-204ENST00000503646 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
TNFAIP8-204ENST00000503646 ZCCHC6Q5VYS8 1495 aaKnown RBP12.9□□□□□ -0.34
TNFAIP8-204ENST00000503646 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP8-204ENST00000503646 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
TNFAIP8-204ENST00000503646 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP8-204ENST00000503646 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP8-204ENST00000503646 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
TNFAIP8-204ENST00000503646 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
TNFAIP8-204ENST00000503646 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
TNFAIP8-204ENST00000503646 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
TNFAIP8-204ENST00000503646 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.4
TNFAIP8-204ENST00000503646 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP8-204ENST00000503646 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP8-204ENST00000503646 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
TNFAIP8-204ENST00000503646 ABCC9O60706 1549 aa12.42□□□□□ -0.42
TNFAIP8-204ENST00000503646 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
TNFAIP8-204ENST00000503646 NACADO15069 1562 aa12.36□□□□□ -0.43
TNFAIP8-204ENST00000503646 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
TNFAIP8-204ENST00000503646 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
TNFAIP8-204ENST00000503646 FAM9AQ8IZU1 332 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP8-204ENST00000503646 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
TNFAIP8-204ENST00000503646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP8-204ENST00000503646 RB1CC1Q8TDY2 1594 aa12.21□□□□□ -0.45
TNFAIP8-204ENST00000503646 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
TNFAIP8-204ENST00000503646 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP8-204ENST00000503646 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
TNFAIP8-204ENST00000503646 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
TNFAIP8-204ENST00000503646 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP8-204ENST00000503646 UNC13AQ9UPW8 1703 aa12.05□□□□□ -0.48
TNFAIP8-204ENST00000503646 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
TNFAIP8-204ENST00000503646 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
TNFAIP8-204ENST00000503646 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
TNFAIP8-204ENST00000503646 MIER1Q8N108 512 aa12□□□□□ -0.49
TNFAIP8-204ENST00000503646 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP8-204ENST00000503646 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
TNFAIP8-204ENST00000503646 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
TNFAIP8-204ENST00000503646 FOXD1Q16676 465 aa11.93□□□□□ -0.5
TNFAIP8-204ENST00000503646 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
TNFAIP8-204ENST00000503646 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
TNFAIP8-204ENST00000503646 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
TNFAIP8-204ENST00000503646 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
TNFAIP8-204ENST00000503646 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP8-204ENST00000503646 WIZO95785 1651 aa11.77□□□□□ -0.53
TNFAIP8-204ENST00000503646 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
TNFAIP8-204ENST00000503646 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP8-204ENST00000503646 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
TNFAIP8-204ENST00000503646 BCANQ96GW7 911 aa11.69□□□□□ -0.54
TNFAIP8-204ENST00000503646 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
TNFAIP8-204ENST00000503646 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.55
TNFAIP8-204ENST00000503646 TOP2AP11388 1531 aaKnown RBP11.63□□□□□ -0.55
TNFAIP8-204ENST00000503646 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
TNFAIP8-204ENST00000503646 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
TNFAIP8-204ENST00000503646 MSH5O43196 834 aa11.6□□□□□ -0.55
TNFAIP8-204ENST00000503646 APLP2Q06481 763 aa11.59□□□□□ -0.55
TNFAIP8-204ENST00000503646 CEP162Q5TB80 1403 aa11.58□□□□□ -0.56
TNFAIP8-204ENST00000503646 FKBP8Q14318 412 aa11.57□□□□□ -0.56
TNFAIP8-204ENST00000503646 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP8-204ENST00000503646 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
TNFAIP8-204ENST00000503646 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
TNFAIP8-204ENST00000503646 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
TNFAIP8-204ENST00000503646 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
TNFAIP8-204ENST00000503646 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
TNFAIP8-204ENST00000503646 ITGAEP38570 1179 aa11.51□□□□□ -0.57
TNFAIP8-204ENST00000503646 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
TNFAIP8-204ENST00000503646 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
TNFAIP8-204ENST00000503646 SOGA1O94964 1423 aa11.48□□□□□ -0.57
TNFAIP8-204ENST00000503646 DEKP35659 375 aaKnown RBP11.48□□□□□ -0.57
TNFAIP8-204ENST00000503646 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
TNFAIP8-204ENST00000503646 RUSC2Q8N2Y8 1516 aa11.44□□□□□ -0.58
TNFAIP8-204ENST00000503646 NEFLP07196 543 aa11.43□□□□□ -0.58
TNFAIP8-204ENST00000503646 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
TNFAIP8-204ENST00000503646 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP8-204ENST00000503646 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
TNFAIP8-204ENST00000503646 HMGXB3Q12766 1538 aa11.4□□□□□ -0.58
TNFAIP8-204ENST00000503646 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
TNFAIP8-204ENST00000503646 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
TNFAIP8-204ENST00000503646 EEA1Q15075 1411 aa11.38□□□□□ -0.59
TNFAIP8-204ENST00000503646 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
TNFAIP8-204ENST00000503646 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
TNFAIP8-204ENST00000503646 CDK11AQ9UQ88 783 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP8-204ENST00000503646 TRIM52Q96A61 297 aa11.3□□□□□ -0.6
TNFAIP8-204ENST00000503646 NBR1Q14596 966 aa11.3□□□□□ -0.6
TNFAIP8-204ENST00000503646 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
TNFAIP8-204ENST00000503646 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
TNFAIP8-204ENST00000503646 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
TNFAIP8-204ENST00000503646 CLIP1P30622 1438 aa11.27□□□□□ -0.6
TNFAIP8-204ENST00000503646 UBE2Q2Q8WVN8 375 aa11.27□□□□□ -0.61
TNFAIP8-204ENST00000503646 KIF21BO75037 1637 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms