RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
DDR1-248ENST00000503180 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
DDR1-248ENST00000503180 ABCC9O60706 1549 aa32.79■■■□□ 2.84
DDR1-248ENST00000503180 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
DDR1-248ENST00000503180 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
DDR1-248ENST00000503180 NACADO15069 1562 aa31.6■■■□□ 2.65
DDR1-248ENST00000503180 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
DDR1-248ENST00000503180 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
DDR1-248ENST00000503180 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
DDR1-248ENST00000503180 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
DDR1-248ENST00000503180 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.51
DDR1-248ENST00000503180 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
DDR1-248ENST00000503180 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
DDR1-248ENST00000503180 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
DDR1-248ENST00000503180 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
DDR1-248ENST00000503180 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
DDR1-248ENST00000503180 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
DDR1-248ENST00000503180 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
DDR1-248ENST00000503180 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
DDR1-248ENST00000503180 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
DDR1-248ENST00000503180 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
DDR1-248ENST00000503180 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
DDR1-248ENST00000503180 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
DDR1-248ENST00000503180 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
DDR1-248ENST00000503180 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
DDR1-248ENST00000503180 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
DDR1-248ENST00000503180 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
DDR1-248ENST00000503180 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
DDR1-248ENST00000503180 WIZO95785 1651 aa28.83■■■□□ 2.21
DDR1-248ENST00000503180 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
DDR1-248ENST00000503180 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
DDR1-248ENST00000503180 NESP48681 1621 aa28.37■■■□□ 2.13
DDR1-248ENST00000503180 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
DDR1-248ENST00000503180 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
DDR1-248ENST00000503180 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
DDR1-248ENST00000503180 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
DDR1-248ENST00000503180 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
DDR1-248ENST00000503180 CFTRP13569 1480 aa28.17■■■□□ 2.1
DDR1-248ENST00000503180 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
DDR1-248ENST00000503180 KIF21AQ7Z4S6 1674 aa27.99■■■□□ 2.07
DDR1-248ENST00000503180 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
DDR1-248ENST00000503180 CUX2O14529 1486 aa27.93■■■□□ 2.06
DDR1-248ENST00000503180 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
DDR1-248ENST00000503180 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
DDR1-248ENST00000503180 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
DDR1-248ENST00000503180 WDR62O43379 1518 aa27.72■■■□□ 2.03
DDR1-248ENST00000503180 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
DDR1-248ENST00000503180 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
DDR1-248ENST00000503180 TOPBP1Q92547 1522 aa27.53■■■□□ 2
DDR1-248ENST00000503180 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
DDR1-248ENST00000503180 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
DDR1-248ENST00000503180 CUX1P39880 1505 aa27.34■■□□□ 1.97
DDR1-248ENST00000503180 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
DDR1-248ENST00000503180 SOGA1O94964 1423 aa27.29■■□□□ 1.96
DDR1-248ENST00000503180 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
DDR1-248ENST00000503180 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
DDR1-248ENST00000503180 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
DDR1-248ENST00000503180 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
DDR1-248ENST00000503180 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
DDR1-248ENST00000503180 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
DDR1-248ENST00000503180 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
DDR1-248ENST00000503180 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
DDR1-248ENST00000503180 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.932e-7■■■■■ 31.6
DDR1-248ENST00000503180 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
DDR1-248ENST00000503180 DNAJC5Q9H3Z4 198 aa27.04■■□□□ 1.92
DDR1-248ENST00000503180 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
DDR1-248ENST00000503180 WDR97A6NE52 1622 aa27.01■■□□□ 1.92
DDR1-248ENST00000503180 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
DDR1-248ENST00000503180 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
DDR1-248ENST00000503180 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
DDR1-248ENST00000503180 GRIN2BQ13224 1484 aa26.92■■□□□ 1.9
DDR1-248ENST00000503180 FBLN2P98095 1184 aa26.88■■□□□ 1.89
DDR1-248ENST00000503180 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
DDR1-248ENST00000503180 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
DDR1-248ENST00000503180 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
DDR1-248ENST00000503180 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
DDR1-248ENST00000503180 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
DDR1-248ENST00000503180 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
DDR1-248ENST00000503180 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
DDR1-248ENST00000503180 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
DDR1-248ENST00000503180 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
DDR1-248ENST00000503180 CHD1O14646 1710 aa26.66■■□□□ 1.86
DDR1-248ENST00000503180 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
DDR1-248ENST00000503180 IGF1RP08069 1367 aa26.62■■□□□ 1.85
DDR1-248ENST00000503180 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
DDR1-248ENST00000503180 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
DDR1-248ENST00000503180 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
DDR1-248ENST00000503180 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
DDR1-248ENST00000503180 CUL7Q14999 1698 aa26.45■■□□□ 1.82
DDR1-248ENST00000503180 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
DDR1-248ENST00000503180 NUP160Q12769 1436 aa26.4■■□□□ 1.82
DDR1-248ENST00000503180 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
DDR1-248ENST00000503180 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
DDR1-248ENST00000503180 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
DDR1-248ENST00000503180 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
DDR1-248ENST00000503180 EEA1Q15075 1411 aa26.31■■□□□ 1.8
DDR1-248ENST00000503180 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
DDR1-248ENST00000503180 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
DDR1-248ENST00000503180 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
DDR1-248ENST00000503180 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms