RNA–Protein interactions for RNA: ENST00000502761.1

CALCOCO2-205, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-205ENST00000502761 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
CALCOCO2-205ENST00000502761 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
CALCOCO2-205ENST00000502761 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
CALCOCO2-205ENST00000502761 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
CALCOCO2-205ENST00000502761 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
CALCOCO2-205ENST00000502761 FOXD1Q16676 465 aa17.69■□□□□ 0.42
CALCOCO2-205ENST00000502761 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
CALCOCO2-205ENST00000502761 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
CALCOCO2-205ENST00000502761 MSH5O43196 834 aa16.51■□□□□ 0.23
CALCOCO2-205ENST00000502761 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
CALCOCO2-205ENST00000502761 ADRA2BP18089 450 aa16.42■□□□□ 0.22
CALCOCO2-205ENST00000502761 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
CALCOCO2-205ENST00000502761 HRCP23327 699 aa15.92■□□□□ 0.14
CALCOCO2-205ENST00000502761 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
CALCOCO2-205ENST00000502761 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
CALCOCO2-205ENST00000502761 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
CALCOCO2-205ENST00000502761 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
CALCOCO2-205ENST00000502761 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
CALCOCO2-205ENST00000502761 MYT1Q01538 1121 aa15.31■□□□□ 0.04
CALCOCO2-205ENST00000502761 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
CALCOCO2-205ENST00000502761 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
CALCOCO2-205ENST00000502761 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO2-205ENST00000502761 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
CALCOCO2-205ENST00000502761 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
CALCOCO2-205ENST00000502761 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
CALCOCO2-205ENST00000502761 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
CALCOCO2-205ENST00000502761 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
CALCOCO2-205ENST00000502761 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CALCOCO2-205ENST00000502761 ABCC9O60706 1549 aa14.78□□□□□ -0.04
CALCOCO2-205ENST00000502761 ACIN1Q9UKV3 1341 aaKnown RBP14.67□□□□□ -0.06
CALCOCO2-205ENST00000502761 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
CALCOCO2-205ENST00000502761 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
CALCOCO2-205ENST00000502761 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
CALCOCO2-205ENST00000502761 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
CALCOCO2-205ENST00000502761 TTBK1Q5TCY1 1321 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO2-205ENST00000502761 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO2-205ENST00000502761 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
CALCOCO2-205ENST00000502761 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
CALCOCO2-205ENST00000502761 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
CALCOCO2-205ENST00000502761 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
CALCOCO2-205ENST00000502761 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
CALCOCO2-205ENST00000502761 CLSPNQ9HAW4 1339 aa14.38□□□□□ -0.11
CALCOCO2-205ENST00000502761 GTF3C3Q9Y5Q9 886 aa14.36□□□□□ -0.11
CALCOCO2-205ENST00000502761 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
CALCOCO2-205ENST00000502761 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
CALCOCO2-205ENST00000502761 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
CALCOCO2-205ENST00000502761 CCER1Q8TC90 406 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-205ENST00000502761 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
CALCOCO2-205ENST00000502761 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
CALCOCO2-205ENST00000502761 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
CALCOCO2-205ENST00000502761 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO2-205ENST00000502761 EEA1Q15075 1411 aa14.15□□□□□ -0.14
CALCOCO2-205ENST00000502761 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
CALCOCO2-205ENST00000502761 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
CALCOCO2-205ENST00000502761 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
CALCOCO2-205ENST00000502761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
CALCOCO2-205ENST00000502761 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
CALCOCO2-205ENST00000502761 NACADO15069 1562 aa14.04□□□□□ -0.16
CALCOCO2-205ENST00000502761 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
CALCOCO2-205ENST00000502761 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
CALCOCO2-205ENST00000502761 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
CALCOCO2-205ENST00000502761 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
CALCOCO2-205ENST00000502761 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
CALCOCO2-205ENST00000502761 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
CALCOCO2-205ENST00000502761 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
CALCOCO2-205ENST00000502761 WIZO95785 1651 aa13.91□□□□□ -0.18
CALCOCO2-205ENST00000502761 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-205ENST00000502761 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
CALCOCO2-205ENST00000502761 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
CALCOCO2-205ENST00000502761 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
CALCOCO2-205ENST00000502761 KIF21BO75037 1637 aa13.87□□□□□ -0.19
CALCOCO2-205ENST00000502761 MIER1Q8N108 512 aa13.84□□□□□ -0.19
CALCOCO2-205ENST00000502761 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-205ENST00000502761 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
CALCOCO2-205ENST00000502761 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
CALCOCO2-205ENST00000502761 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
CALCOCO2-205ENST00000502761 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
CALCOCO2-205ENST00000502761 KCNA4P22459 653 aa13.78□□□□□ -0.2
CALCOCO2-205ENST00000502761 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
CALCOCO2-205ENST00000502761 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
CALCOCO2-205ENST00000502761 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-205ENST00000502761 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
CALCOCO2-205ENST00000502761 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
CALCOCO2-205ENST00000502761 CUX2O14529 1486 aa13.72□□□□□ -0.21
CALCOCO2-205ENST00000502761 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
CALCOCO2-205ENST00000502761 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
CALCOCO2-205ENST00000502761 SOGA1O94964 1423 aa13.69□□□□□ -0.22
CALCOCO2-205ENST00000502761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.222e-7■■□□□ 12.6
CALCOCO2-205ENST00000502761 CLIP1P30622 1438 aa13.65□□□□□ -0.22
CALCOCO2-205ENST00000502761 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-205ENST00000502761 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
CALCOCO2-205ENST00000502761 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
CALCOCO2-205ENST00000502761 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
CALCOCO2-205ENST00000502761 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
CALCOCO2-205ENST00000502761 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
CALCOCO2-205ENST00000502761 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
CALCOCO2-205ENST00000502761 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
CALCOCO2-205ENST00000502761 APLP2Q06481 763 aa13.52□□□□□ -0.25
CALCOCO2-205ENST00000502761 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-205ENST00000502761 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms