RNA–Protein interactions for RNA: ENST00000502559.1

SH3TC1-205, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 3,798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-205ENST00000502559 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
SH3TC1-205ENST00000502559 HRCP23327 699 aa22.13■■□□□ 1.13
SH3TC1-205ENST00000502559 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
SH3TC1-205ENST00000502559 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
SH3TC1-205ENST00000502559 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SH3TC1-205ENST00000502559 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
SH3TC1-205ENST00000502559 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.04
SH3TC1-205ENST00000502559 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
SH3TC1-205ENST00000502559 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
SH3TC1-205ENST00000502559 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
SH3TC1-205ENST00000502559 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SH3TC1-205ENST00000502559 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
SH3TC1-205ENST00000502559 TRIM26Q12899 539 aaPredicted RBP20.85■□□□□ 0.93
SH3TC1-205ENST00000502559 MYT1Q01538 1121 aa20.74■□□□□ 0.91
SH3TC1-205ENST00000502559 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
SH3TC1-205ENST00000502559 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
SH3TC1-205ENST00000502559 NEUROD1Q13562 356 aa20.52■□□□□ 0.88
SH3TC1-205ENST00000502559 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
SH3TC1-205ENST00000502559 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
SH3TC1-205ENST00000502559 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
SH3TC1-205ENST00000502559 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
SH3TC1-205ENST00000502559 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
SH3TC1-205ENST00000502559 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
SH3TC1-205ENST00000502559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
SH3TC1-205ENST00000502559 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
SH3TC1-205ENST00000502559 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
SH3TC1-205ENST00000502559 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
SH3TC1-205ENST00000502559 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
SH3TC1-205ENST00000502559 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
SH3TC1-205ENST00000502559 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
SH3TC1-205ENST00000502559 ABCC9O60706 1549 aa19.92■□□□□ 0.78
SH3TC1-205ENST00000502559 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
SH3TC1-205ENST00000502559 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
SH3TC1-205ENST00000502559 MIER1Q8N108 512 aa19.6■□□□□ 0.73
SH3TC1-205ENST00000502559 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
SH3TC1-205ENST00000502559 PRKCSHP14314 528 aaPredicted RBP19.52■□□□□ 0.72
SH3TC1-205ENST00000502559 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
SH3TC1-205ENST00000502559 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
SH3TC1-205ENST00000502559 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
SH3TC1-205ENST00000502559 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
SH3TC1-205ENST00000502559 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
SH3TC1-205ENST00000502559 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
SH3TC1-205ENST00000502559 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
SH3TC1-205ENST00000502559 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
SH3TC1-205ENST00000502559 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
SH3TC1-205ENST00000502559 BCANQ96GW7 911 aa19.16■□□□□ 0.66
SH3TC1-205ENST00000502559 NACADO15069 1562 aa19.16■□□□□ 0.66
SH3TC1-205ENST00000502559 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
SH3TC1-205ENST00000502559 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
SH3TC1-205ENST00000502559 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
SH3TC1-205ENST00000502559 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
SH3TC1-205ENST00000502559 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SH3TC1-205ENST00000502559 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
SH3TC1-205ENST00000502559 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
SH3TC1-205ENST00000502559 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SH3TC1-205ENST00000502559 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
SH3TC1-205ENST00000502559 ITGAEP38570 1179 aa18.83■□□□□ 0.6
SH3TC1-205ENST00000502559 APLP2Q06481 763 aa18.76■□□□□ 0.59
SH3TC1-205ENST00000502559 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
SH3TC1-205ENST00000502559 NEFLP07196 543 aa18.73■□□□□ 0.59
SH3TC1-205ENST00000502559 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
SH3TC1-205ENST00000502559 MSH5O43196 834 aa18.69■□□□□ 0.58
SH3TC1-205ENST00000502559 SOGA1O94964 1423 aa18.67■□□□□ 0.58
SH3TC1-205ENST00000502559 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SH3TC1-205ENST00000502559 CCDC88BA6NC98 1476 aa18.66■□□□□ 0.58
SH3TC1-205ENST00000502559 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
SH3TC1-205ENST00000502559 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
SH3TC1-205ENST00000502559 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
SH3TC1-205ENST00000502559 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
SH3TC1-205ENST00000502559 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
SH3TC1-205ENST00000502559 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
SH3TC1-205ENST00000502559 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
SH3TC1-205ENST00000502559 WIZO95785 1651 aa18.5■□□□□ 0.55
SH3TC1-205ENST00000502559 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
SH3TC1-205ENST00000502559 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
SH3TC1-205ENST00000502559 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
SH3TC1-205ENST00000502559 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-205ENST00000502559 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
SH3TC1-205ENST00000502559 CLIP1P30622 1438 aa18.41■□□□□ 0.54
SH3TC1-205ENST00000502559 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-205ENST00000502559 NBR1Q14596 966 aa18.39■□□□□ 0.53
SH3TC1-205ENST00000502559 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
SH3TC1-205ENST00000502559 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SH3TC1-205ENST00000502559 EEA1Q15075 1411 aa18.33■□□□□ 0.52
SH3TC1-205ENST00000502559 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
SH3TC1-205ENST00000502559 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
SH3TC1-205ENST00000502559 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
SH3TC1-205ENST00000502559 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
SH3TC1-205ENST00000502559 ANP32CO43423 234 aa18.3■□□□□ 0.52
SH3TC1-205ENST00000502559 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
SH3TC1-205ENST00000502559 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
SH3TC1-205ENST00000502559 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
SH3TC1-205ENST00000502559 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
SH3TC1-205ENST00000502559 SIN3AQ96ST3 1273 aa18.21■□□□□ 0.51
SH3TC1-205ENST00000502559 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
SH3TC1-205ENST00000502559 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
SH3TC1-205ENST00000502559 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
SH3TC1-205ENST00000502559 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms