RNA–Protein interactions for RNA: ENST00000502301.5

LINC00461-202, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-202ENST00000502301 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
LINC00461-202ENST00000502301 ABCC9O60706 1549 aa21.43■■□□□ 1.02
LINC00461-202ENST00000502301 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
LINC00461-202ENST00000502301 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
LINC00461-202ENST00000502301 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
LINC00461-202ENST00000502301 NACADO15069 1562 aa20.03■□□□□ 0.8
LINC00461-202ENST00000502301 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
LINC00461-202ENST00000502301 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
LINC00461-202ENST00000502301 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
LINC00461-202ENST00000502301 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
LINC00461-202ENST00000502301 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
LINC00461-202ENST00000502301 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
LINC00461-202ENST00000502301 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
LINC00461-202ENST00000502301 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
LINC00461-202ENST00000502301 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
LINC00461-202ENST00000502301 SCRIBQ14160 1630 aa19.28■□□□□ 0.68
LINC00461-202ENST00000502301 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
LINC00461-202ENST00000502301 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
LINC00461-202ENST00000502301 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
LINC00461-202ENST00000502301 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
LINC00461-202ENST00000502301 CUX2O14529 1486 aa18.5■□□□□ 0.55
LINC00461-202ENST00000502301 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
LINC00461-202ENST00000502301 ERCC6Q03468 1493 aa18.46■□□□□ 0.54
LINC00461-202ENST00000502301 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
LINC00461-202ENST00000502301 NESP48681 1621 aa18.36■□□□□ 0.53
LINC00461-202ENST00000502301 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
LINC00461-202ENST00000502301 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
LINC00461-202ENST00000502301 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
LINC00461-202ENST00000502301 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
LINC00461-202ENST00000502301 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
LINC00461-202ENST00000502301 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
LINC00461-202ENST00000502301 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
LINC00461-202ENST00000502301 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
LINC00461-202ENST00000502301 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
LINC00461-202ENST00000502301 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
LINC00461-202ENST00000502301 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
LINC00461-202ENST00000502301 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
LINC00461-202ENST00000502301 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
LINC00461-202ENST00000502301 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
LINC00461-202ENST00000502301 WIZO95785 1651 aa17.91■□□□□ 0.46
LINC00461-202ENST00000502301 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
LINC00461-202ENST00000502301 WDR62O43379 1518 aa17.85■□□□□ 0.45
LINC00461-202ENST00000502301 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
LINC00461-202ENST00000502301 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
LINC00461-202ENST00000502301 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
LINC00461-202ENST00000502301 CFTRP13569 1480 aa17.65■□□□□ 0.42
LINC00461-202ENST00000502301 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
LINC00461-202ENST00000502301 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
LINC00461-202ENST00000502301 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
LINC00461-202ENST00000502301 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
LINC00461-202ENST00000502301 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
LINC00461-202ENST00000502301 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
LINC00461-202ENST00000502301 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
LINC00461-202ENST00000502301 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
LINC00461-202ENST00000502301 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
LINC00461-202ENST00000502301 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
LINC00461-202ENST00000502301 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
LINC00461-202ENST00000502301 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
LINC00461-202ENST00000502301 CHD1O14646 1710 aa17.35■□□□□ 0.37
LINC00461-202ENST00000502301 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
LINC00461-202ENST00000502301 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
LINC00461-202ENST00000502301 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
LINC00461-202ENST00000502301 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
LINC00461-202ENST00000502301 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.36
LINC00461-202ENST00000502301 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
LINC00461-202ENST00000502301 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
LINC00461-202ENST00000502301 FBLN2P98095 1184 aa17.19■□□□□ 0.34
LINC00461-202ENST00000502301 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
LINC00461-202ENST00000502301 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
LINC00461-202ENST00000502301 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
LINC00461-202ENST00000502301 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
LINC00461-202ENST00000502301 SOGA1O94964 1423 aa17.09■□□□□ 0.33
LINC00461-202ENST00000502301 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
LINC00461-202ENST00000502301 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
LINC00461-202ENST00000502301 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
LINC00461-202ENST00000502301 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
LINC00461-202ENST00000502301 CUX1P39880 1505 aa16.99■□□□□ 0.31
LINC00461-202ENST00000502301 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
LINC00461-202ENST00000502301 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
LINC00461-202ENST00000502301 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
LINC00461-202ENST00000502301 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
LINC00461-202ENST00000502301 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
LINC00461-202ENST00000502301 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
LINC00461-202ENST00000502301 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
LINC00461-202ENST00000502301 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
LINC00461-202ENST00000502301 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
LINC00461-202ENST00000502301 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
LINC00461-202ENST00000502301 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
LINC00461-202ENST00000502301 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
LINC00461-202ENST00000502301 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
LINC00461-202ENST00000502301 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
LINC00461-202ENST00000502301 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
LINC00461-202ENST00000502301 NUP160Q12769 1436 aa16.68■□□□□ 0.26
LINC00461-202ENST00000502301 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
LINC00461-202ENST00000502301 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
LINC00461-202ENST00000502301 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
LINC00461-202ENST00000502301 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
LINC00461-202ENST00000502301 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
LINC00461-202ENST00000502301 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
LINC00461-202ENST00000502301 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms