RNA–Protein interactions for RNA: ENST00000500692.6

GNPDA1-202, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GNPDA1, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-202ENST00000500692 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
GNPDA1-202ENST00000500692 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
GNPDA1-202ENST00000500692 ABCC9O60706 1549 aa22.34■■□□□ 1.17
GNPDA1-202ENST00000500692 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
GNPDA1-202ENST00000500692 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
GNPDA1-202ENST00000500692 NACADO15069 1562 aa21.43■■□□□ 1.02
GNPDA1-202ENST00000500692 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
GNPDA1-202ENST00000500692 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
GNPDA1-202ENST00000500692 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
GNPDA1-202ENST00000500692 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
GNPDA1-202ENST00000500692 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
GNPDA1-202ENST00000500692 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
GNPDA1-202ENST00000500692 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
GNPDA1-202ENST00000500692 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.92
GNPDA1-202ENST00000500692 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
GNPDA1-202ENST00000500692 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
GNPDA1-202ENST00000500692 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
GNPDA1-202ENST00000500692 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
GNPDA1-202ENST00000500692 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
GNPDA1-202ENST00000500692 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
GNPDA1-202ENST00000500692 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
GNPDA1-202ENST00000500692 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
GNPDA1-202ENST00000500692 SUPT5HO00267 1087 aaKnown RBP19.96■□□□□ 0.79
GNPDA1-202ENST00000500692 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
GNPDA1-202ENST00000500692 WIZO95785 1651 aa19.94■□□□□ 0.78
GNPDA1-202ENST00000500692 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
GNPDA1-202ENST00000500692 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
GNPDA1-202ENST00000500692 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
GNPDA1-202ENST00000500692 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
GNPDA1-202ENST00000500692 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
GNPDA1-202ENST00000500692 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
GNPDA1-202ENST00000500692 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
GNPDA1-202ENST00000500692 NESP48681 1621 aa19.44■□□□□ 0.7
GNPDA1-202ENST00000500692 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
GNPDA1-202ENST00000500692 CFTRP13569 1480 aa19.25■□□□□ 0.67
GNPDA1-202ENST00000500692 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
GNPDA1-202ENST00000500692 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
GNPDA1-202ENST00000500692 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
GNPDA1-202ENST00000500692 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
GNPDA1-202ENST00000500692 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
GNPDA1-202ENST00000500692 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
GNPDA1-202ENST00000500692 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
GNPDA1-202ENST00000500692 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
GNPDA1-202ENST00000500692 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
GNPDA1-202ENST00000500692 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
GNPDA1-202ENST00000500692 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
GNPDA1-202ENST00000500692 CUX1P39880 1505 aa18.84■□□□□ 0.61
GNPDA1-202ENST00000500692 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
GNPDA1-202ENST00000500692 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
GNPDA1-202ENST00000500692 WDR62O43379 1518 aa18.83■□□□□ 0.6
GNPDA1-202ENST00000500692 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
GNPDA1-202ENST00000500692 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
GNPDA1-202ENST00000500692 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
GNPDA1-202ENST00000500692 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
GNPDA1-202ENST00000500692 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
GNPDA1-202ENST00000500692 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
GNPDA1-202ENST00000500692 CUX2O14529 1486 aa18.71■□□□□ 0.59
GNPDA1-202ENST00000500692 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.58
GNPDA1-202ENST00000500692 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
GNPDA1-202ENST00000500692 SOGA1O94964 1423 aa18.66■□□□□ 0.58
GNPDA1-202ENST00000500692 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
GNPDA1-202ENST00000500692 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
GNPDA1-202ENST00000500692 TDRD9Q8NDG6 1382 aaKnown RBP18.61■□□□□ 0.57
GNPDA1-202ENST00000500692 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
GNPDA1-202ENST00000500692 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
GNPDA1-202ENST00000500692 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.56
GNPDA1-202ENST00000500692 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
GNPDA1-202ENST00000500692 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
GNPDA1-202ENST00000500692 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
GNPDA1-202ENST00000500692 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
GNPDA1-202ENST00000500692 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
GNPDA1-202ENST00000500692 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
GNPDA1-202ENST00000500692 KIF27Q86VH2 1401 aa18.39■□□□□ 0.54
GNPDA1-202ENST00000500692 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
GNPDA1-202ENST00000500692 FBLN2P98095 1184 aa18.38■□□□□ 0.53
GNPDA1-202ENST00000500692 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
GNPDA1-202ENST00000500692 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
GNPDA1-202ENST00000500692 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
GNPDA1-202ENST00000500692 IGF1RP08069 1367 aa18.32■□□□□ 0.52
GNPDA1-202ENST00000500692 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
GNPDA1-202ENST00000500692 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.51
GNPDA1-202ENST00000500692 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
GNPDA1-202ENST00000500692 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
GNPDA1-202ENST00000500692 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
GNPDA1-202ENST00000500692 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
GNPDA1-202ENST00000500692 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
GNPDA1-202ENST00000500692 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
GNPDA1-202ENST00000500692 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
GNPDA1-202ENST00000500692 CHD1O14646 1710 aa18.18■□□□□ 0.5
GNPDA1-202ENST00000500692 SLC24A1O60721 1099 aa18.17■□□□□ 0.5
GNPDA1-202ENST00000500692 EEA1Q15075 1411 aa18.15■□□□□ 0.5
GNPDA1-202ENST00000500692 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
GNPDA1-202ENST00000500692 CUL7Q14999 1698 aa18.12■□□□□ 0.49
GNPDA1-202ENST00000500692 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
GNPDA1-202ENST00000500692 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
GNPDA1-202ENST00000500692 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
GNPDA1-202ENST00000500692 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.48
GNPDA1-202ENST00000500692 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
GNPDA1-202ENST00000500692 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
GNPDA1-202ENST00000500692 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms