RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
CSTF1-207ENST00000498689 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
CSTF1-207ENST00000498689 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
CSTF1-207ENST00000498689 ABCC9O60706 1549 aa13.36□□□□□ -0.27
CSTF1-207ENST00000498689 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
CSTF1-207ENST00000498689 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
CSTF1-207ENST00000498689 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
CSTF1-207ENST00000498689 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
CSTF1-207ENST00000498689 FOXD1Q16676 465 aa12.5□□□□□ -0.41
CSTF1-207ENST00000498689 CCDC180Q9P1Z9 1646 aa12.35□□□□□ -0.43
CSTF1-207ENST00000498689 UNC13AQ9UPW8 1703 aa12.25□□□□□ -0.45
CSTF1-207ENST00000498689 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSTF1-207ENST00000498689 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
CSTF1-207ENST00000498689 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
CSTF1-207ENST00000498689 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
CSTF1-207ENST00000498689 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
CSTF1-207ENST00000498689 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
CSTF1-207ENST00000498689 CUX2O14529 1486 aa11.83□□□□□ -0.52
CSTF1-207ENST00000498689 NACADO15069 1562 aa11.82□□□□□ -0.52
CSTF1-207ENST00000498689 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
CSTF1-207ENST00000498689 MSH5O43196 834 aa11.72□□□□□ -0.53
CSTF1-207ENST00000498689 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
CSTF1-207ENST00000498689 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
CSTF1-207ENST00000498689 PIAS4Q8N2W9 510 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-207ENST00000498689 ADRA2BP18089 450 aa11.57□□□□□ -0.56
CSTF1-207ENST00000498689 PPP6R1Q9UPN7 881 aa11.57□□□□□ -0.56
CSTF1-207ENST00000498689 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
CSTF1-207ENST00000498689 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
CSTF1-207ENST00000498689 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.57
CSTF1-207ENST00000498689 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
CSTF1-207ENST00000498689 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
CSTF1-207ENST00000498689 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
CSTF1-207ENST00000498689 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
CSTF1-207ENST00000498689 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
CSTF1-207ENST00000498689 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
CSTF1-207ENST00000498689 NESP48681 1621 aa11.24□□□□□ -0.61
CSTF1-207ENST00000498689 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
CSTF1-207ENST00000498689 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
CSTF1-207ENST00000498689 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
CSTF1-207ENST00000498689 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
CSTF1-207ENST00000498689 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
CSTF1-207ENST00000498689 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
CSTF1-207ENST00000498689 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
CSTF1-207ENST00000498689 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
CSTF1-207ENST00000498689 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
CSTF1-207ENST00000498689 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
CSTF1-207ENST00000498689 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
CSTF1-207ENST00000498689 WDR62O43379 1518 aa10.85□□□□□ -0.67
CSTF1-207ENST00000498689 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
CSTF1-207ENST00000498689 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
CSTF1-207ENST00000498689 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
CSTF1-207ENST00000498689 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
CSTF1-207ENST00000498689 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
CSTF1-207ENST00000498689 CHD1O14646 1710 aa10.7□□□□□ -0.7
CSTF1-207ENST00000498689 LMTK3Q96Q04 1460 aa10.7□□□□□ -0.7
CSTF1-207ENST00000498689 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
CSTF1-207ENST00000498689 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
CSTF1-207ENST00000498689 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
CSTF1-207ENST00000498689 ILDR2Q71H61 639 aa10.66□□□□□ -0.7
CSTF1-207ENST00000498689 SOCS7O14512 581 aa10.64□□□□□ -0.71
CSTF1-207ENST00000498689 SMARCA4P51532 1647 aa10.64□□□□□ -0.71
CSTF1-207ENST00000498689 ERCC6L2Q5T890 1561 aa10.62□□□□□ -0.71
CSTF1-207ENST00000498689 KIF13AQ9H1H9 1805 aa10.61□□□□□ -0.71
CSTF1-207ENST00000498689 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
CSTF1-207ENST00000498689 BAZ1BQ9UIG0 1483 aaKnown RBP10.59□□□□□ -0.71
CSTF1-207ENST00000498689 HECW2Q9P2P5 1572 aa10.59□□□□□ -0.71
CSTF1-207ENST00000498689 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
CSTF1-207ENST00000498689 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
CSTF1-207ENST00000498689 SCAF1Q9H7N4 1312 aaKnown RBP10.55□□□□□ -0.72
CSTF1-207ENST00000498689 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
CSTF1-207ENST00000498689 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-207ENST00000498689 URB2Q14146 1524 aaKnown RBP10.5□□□□□ -0.73
CSTF1-207ENST00000498689 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
CSTF1-207ENST00000498689 EIF4G3O43432 1585 aaKnown RBP10.47□□□□□ -0.73
CSTF1-207ENST00000498689 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
CSTF1-207ENST00000498689 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
CSTF1-207ENST00000498689 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
CSTF1-207ENST00000498689 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
CSTF1-207ENST00000498689 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
CSTF1-207ENST00000498689 FBLN2P98095 1184 aa10.35□□□□□ -0.75
CSTF1-207ENST00000498689 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
CSTF1-207ENST00000498689 KDM6BO15054 1643 aa10.34□□□□□ -0.75
CSTF1-207ENST00000498689 ADGRL1O94910 1474 aa10.34□□□□□ -0.75
CSTF1-207ENST00000498689 IFT140Q96RY7 1462 aa10.33□□□□□ -0.76
CSTF1-207ENST00000498689 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
CSTF1-207ENST00000498689 SPATA31D1Q6ZQQ2 1576 aa10.3□□□□□ -0.76
CSTF1-207ENST00000498689 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.763e-8■■■■■ 29
CSTF1-207ENST00000498689 DCAF8L1A6NGE4 600 aa10.28□□□□□ -0.76
CSTF1-207ENST00000498689 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
CSTF1-207ENST00000498689 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
CSTF1-207ENST00000498689 SYNJ1O43426 1573 aa10.23□□□□□ -0.77
CSTF1-207ENST00000498689 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
CSTF1-207ENST00000498689 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
CSTF1-207ENST00000498689 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.78
CSTF1-207ENST00000498689 CFTRP13569 1480 aa10.19□□□□□ -0.78
CSTF1-207ENST00000498689 DIP2BQ9P265 1576 aa10.17□□□□□ -0.78
CSTF1-207ENST00000498689 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
CSTF1-207ENST00000498689 FAM69CQ0P6D2 419 aa10.14□□□□□ -0.79
CSTF1-207ENST00000498689 WIZO95785 1651 aa10.13□□□□□ -0.79
CSTF1-207ENST00000498689 SNAPC4Q5SXM2 1469 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms