RNA–Protein interactions for RNA: ENST00000498571.1

AMT-220, Transcript of aminomethyltransferase, humanhuman

TSL 2

Gene AMT, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-220ENST00000498571 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
AMT-220ENST00000498571 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
AMT-220ENST00000498571 ABCC9O60706 1549 aa29.97■■■□□ 2.39
AMT-220ENST00000498571 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
AMT-220ENST00000498571 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
AMT-220ENST00000498571 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
AMT-220ENST00000498571 NACADO15069 1562 aa28.78■■■□□ 2.2
AMT-220ENST00000498571 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
AMT-220ENST00000498571 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
AMT-220ENST00000498571 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
AMT-220ENST00000498571 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
AMT-220ENST00000498571 PABPN1Q86U42 306 aaKnown RBP eCLIP28.05■■■□□ 2.08
AMT-220ENST00000498571 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
AMT-220ENST00000498571 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
AMT-220ENST00000498571 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
AMT-220ENST00000498571 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
AMT-220ENST00000498571 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
AMT-220ENST00000498571 CECR2Q9BXF3 1484 aa26.97■■□□□ 1.91
AMT-220ENST00000498571 SMARCA4P51532 1647 aa26.83■■□□□ 1.88
AMT-220ENST00000498571 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
AMT-220ENST00000498571 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
AMT-220ENST00000498571 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
AMT-220ENST00000498571 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
AMT-220ENST00000498571 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
AMT-220ENST00000498571 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
AMT-220ENST00000498571 WIZO95785 1651 aa26.44■■□□□ 1.82
AMT-220ENST00000498571 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
AMT-220ENST00000498571 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
AMT-220ENST00000498571 RSF1Q96T23 1441 aaPredicted RBP26.4■■□□□ 1.82
AMT-220ENST00000498571 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
AMT-220ENST00000498571 NESP48681 1621 aa25.98■■□□□ 1.75
AMT-220ENST00000498571 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
AMT-220ENST00000498571 LAMC3Q9Y6N6 1575 aa25.84■■□□□ 1.73
AMT-220ENST00000498571 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
AMT-220ENST00000498571 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
AMT-220ENST00000498571 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
AMT-220ENST00000498571 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
AMT-220ENST00000498571 CFTRP13569 1480 aa25.67■■□□□ 1.7
AMT-220ENST00000498571 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
AMT-220ENST00000498571 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
AMT-220ENST00000498571 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
AMT-220ENST00000498571 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
AMT-220ENST00000498571 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
AMT-220ENST00000498571 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
AMT-220ENST00000498571 CUX2O14529 1486 aa25.4■■□□□ 1.66
AMT-220ENST00000498571 WDR62O43379 1518 aa25.32■■□□□ 1.64
AMT-220ENST00000498571 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
AMT-220ENST00000498571 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
AMT-220ENST00000498571 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
AMT-220ENST00000498571 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
AMT-220ENST00000498571 CUX1P39880 1505 aa25.03■■□□□ 1.6
AMT-220ENST00000498571 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
AMT-220ENST00000498571 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
AMT-220ENST00000498571 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
AMT-220ENST00000498571 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
AMT-220ENST00000498571 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
AMT-220ENST00000498571 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
AMT-220ENST00000498571 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
AMT-220ENST00000498571 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
AMT-220ENST00000498571 SOGA1O94964 1423 aa24.86■■□□□ 1.57
AMT-220ENST00000498571 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
AMT-220ENST00000498571 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
AMT-220ENST00000498571 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
AMT-220ENST00000498571 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
AMT-220ENST00000498571 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.55
AMT-220ENST00000498571 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
AMT-220ENST00000498571 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
AMT-220ENST00000498571 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
AMT-220ENST00000498571 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
AMT-220ENST00000498571 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
AMT-220ENST00000498571 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
AMT-220ENST00000498571 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
AMT-220ENST00000498571 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
AMT-220ENST00000498571 FBLN2P98095 1184 aa24.48■■□□□ 1.51
AMT-220ENST00000498571 CHD1O14646 1710 aa24.47■■□□□ 1.51
AMT-220ENST00000498571 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
AMT-220ENST00000498571 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
AMT-220ENST00000498571 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
AMT-220ENST00000498571 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
AMT-220ENST00000498571 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
AMT-220ENST00000498571 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
AMT-220ENST00000498571 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
AMT-220ENST00000498571 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
AMT-220ENST00000498571 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
AMT-220ENST00000498571 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
AMT-220ENST00000498571 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
AMT-220ENST00000498571 IGF1RP08069 1367 aa24.24■■□□□ 1.47
AMT-220ENST00000498571 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
AMT-220ENST00000498571 CUL7Q14999 1698 aa24.18■■□□□ 1.46
AMT-220ENST00000498571 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
AMT-220ENST00000498571 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
AMT-220ENST00000498571 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
AMT-220ENST00000498571 NUP160Q12769 1436 aa24.07■■□□□ 1.44
AMT-220ENST00000498571 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
AMT-220ENST00000498571 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
AMT-220ENST00000498571 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
AMT-220ENST00000498571 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
AMT-220ENST00000498571 ARHGEF11O15085 1522 aa24.03■■□□□ 1.44
AMT-220ENST00000498571 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
AMT-220ENST00000498571 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms