RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 NISCHQ9Y2I1 1504 aa44.89■■■■■ 4.78
AGAP3-225ENST00000498559 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
AGAP3-225ENST00000498559 ABCC9O60706 1549 aa39.78■■■■□ 3.96
AGAP3-225ENST00000498559 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
AGAP3-225ENST00000498559 NACADO15069 1562 aa37.89■■■■□ 3.66
AGAP3-225ENST00000498559 MYO15BQ96JP2 1530 aa37.54■■■■□ 3.6
AGAP3-225ENST00000498559 DCAF8L2P0C7V8 631 aa37.52■■■■□ 3.6
AGAP3-225ENST00000498559 DNAJC5BQ9UF47 199 aa37.41■■■■□ 3.58
AGAP3-225ENST00000498559 ZCCHC6Q5VYS8 1495 aaKnown RBP37.3■■■■□ 3.56
AGAP3-225ENST00000498559 UNC13AQ9UPW8 1703 aa37.24■■■■□ 3.55
AGAP3-225ENST00000498559 DCAF1Q9Y4B6 1507 aa37.16■■■■□ 3.54
AGAP3-225ENST00000498559 PABPN1Q86U42 306 aaKnown RBP eCLIP37.02■■■■□ 3.52
AGAP3-225ENST00000498559 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
AGAP3-225ENST00000498559 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
AGAP3-225ENST00000498559 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
AGAP3-225ENST00000498559 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
AGAP3-225ENST00000498559 CC2D2AQ9P2K1 1620 aa36■■■■□ 3.35
AGAP3-225ENST00000498559 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
AGAP3-225ENST00000498559 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
AGAP3-225ENST00000498559 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
AGAP3-225ENST00000498559 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
AGAP3-225ENST00000498559 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
AGAP3-225ENST00000498559 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
AGAP3-225ENST00000498559 HMGXB3Q12766 1538 aa34.78■■■■□ 3.16
AGAP3-225ENST00000498559 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
AGAP3-225ENST00000498559 MROH2BQ7Z745 1585 aa34.57■■■■□ 3.13
AGAP3-225ENST00000498559 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
AGAP3-225ENST00000498559 BAZ1BQ9UIG0 1483 aaKnown RBP34.56■■■■□ 3.12
AGAP3-225ENST00000498559 CUX2O14529 1486 aa34.4■■■■□ 3.1
AGAP3-225ENST00000498559 ERCC6Q03468 1493 aa34.32■■■■□ 3.08
AGAP3-225ENST00000498559 NESP48681 1621 aa34.28■■■■□ 3.08
AGAP3-225ENST00000498559 WIZO95785 1651 aa34.16■■■■□ 3.06
AGAP3-225ENST00000498559 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
AGAP3-225ENST00000498559 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
AGAP3-225ENST00000498559 THOC2Q8NI27 1593 aaKnown RBP33.95■■■■□ 3.03
AGAP3-225ENST00000498559 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
AGAP3-225ENST00000498559 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
AGAP3-225ENST00000498559 CADPSQ9ULU8 1353 aa33.88■■■■□ 3.01
AGAP3-225ENST00000498559 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
AGAP3-225ENST00000498559 CFTRP13569 1480 aa33.6■■■□□ 2.97
AGAP3-225ENST00000498559 MRC2Q9UBG0 1479 aa33.6■■■□□ 2.97
AGAP3-225ENST00000498559 WDR62O43379 1518 aa33.55■■■□□ 2.96
AGAP3-225ENST00000498559 CEP164Q9UPV0 1460 aa33.52■■■□□ 2.96
AGAP3-225ENST00000498559 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
AGAP3-225ENST00000498559 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
AGAP3-225ENST00000498559 PRDM2Q13029 1718 aa33.35■■■□□ 2.93
AGAP3-225ENST00000498559 URB2Q14146 1524 aaKnown RBP33.24■■■□□ 2.91
AGAP3-225ENST00000498559 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
AGAP3-225ENST00000498559 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
AGAP3-225ENST00000498559 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
AGAP3-225ENST00000498559 DNMBPQ6XZF7 1577 aa32.85■■■□□ 2.85
AGAP3-225ENST00000498559 IFT140Q96RY7 1462 aa32.85■■■□□ 2.85
AGAP3-225ENST00000498559 ZNF608Q9ULD9 1512 aaPredicted RBP32.75■■■□□ 2.83
AGAP3-225ENST00000498559 OSCARQ8IYS5 282 aa32.7■■■□□ 2.83
AGAP3-225ENST00000498559 TARBP1Q13395 1621 aaKnown RBP32.65■■■□□ 2.82
AGAP3-225ENST00000498559 EIF4G3O43432 1585 aaKnown RBP32.63■■■□□ 2.81
AGAP3-225ENST00000498559 POLA1P09884 1462 aaPredicted RBP32.61■■■□□ 2.81
AGAP3-225ENST00000498559 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
AGAP3-225ENST00000498559 CUX1P39880 1505 aa32.47■■■□□ 2.79
AGAP3-225ENST00000498559 AQRO60306 1485 aaKnown RBP eCLIP32.46■■■□□ 2.793e-7■■■■□ 25.4
AGAP3-225ENST00000498559 RAD54L2Q9Y4B4 1467 aa32.44■■■□□ 2.78
AGAP3-225ENST00000498559 FGD5Q6ZNL6 1462 aa32.43■■■□□ 2.78
AGAP3-225ENST00000498559 SOGA1O94964 1423 aa32.41■■■□□ 2.78
AGAP3-225ENST00000498559 RIMBP3CA6NJZ7 1639 aa32.38■■■□□ 2.77
AGAP3-225ENST00000498559 RIMBP3BA6NNM3 1639 aa32.38■■■□□ 2.77
AGAP3-225ENST00000498559 RIMBP3Q9UFD9 1639 aa32.38■■■□□ 2.77
AGAP3-225ENST00000498559 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
AGAP3-225ENST00000498559 CHD1O14646 1710 aa32.31■■■□□ 2.76
AGAP3-225ENST00000498559 TDRD9Q8NDG6 1382 aaKnown RBP32.3■■■□□ 2.76
AGAP3-225ENST00000498559 ARHGEF11O15085 1522 aa32.24■■■□□ 2.75
AGAP3-225ENST00000498559 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
AGAP3-225ENST00000498559 GRIN2BQ13224 1484 aa32.14■■■□□ 2.74
AGAP3-225ENST00000498559 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
AGAP3-225ENST00000498559 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
AGAP3-225ENST00000498559 FBLN2P98095 1184 aa32.08■■■□□ 2.73
AGAP3-225ENST00000498559 BIVM-ERCC5R4GMW8 1640 aa32.08■■■□□ 2.73
AGAP3-225ENST00000498559 PBRM1Q86U86 1689 aa32.07■■■□□ 2.72
AGAP3-225ENST00000498559 ABCA5Q8WWZ7 1642 aa32.07■■■□□ 2.72
AGAP3-225ENST00000498559 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
AGAP3-225ENST00000498559 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
AGAP3-225ENST00000498559 WRNQ14191 1432 aaPredicted RBP eCLIP32.02■■■□□ 2.72
AGAP3-225ENST00000498559 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
AGAP3-225ENST00000498559 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
AGAP3-225ENST00000498559 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
AGAP3-225ENST00000498559 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
AGAP3-225ENST00000498559 CYB5RLQ6IPT4 315 aa31.91■■■□□ 2.7
AGAP3-225ENST00000498559 ARAP1Q96P48 1450 aa31.9■■■□□ 2.7
AGAP3-225ENST00000498559 ADAMTS12P58397 1594 aa31.79■■■□□ 2.68
AGAP3-225ENST00000498559 GRIN2AQ12879 1464 aa31.74■■■□□ 2.67
AGAP3-225ENST00000498559 ERICH3Q5RHP9 1530 aa31.72■■■□□ 2.67
AGAP3-225ENST00000498559 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
AGAP3-225ENST00000498559 NUP160Q12769 1436 aa31.64■■■□□ 2.66
AGAP3-225ENST00000498559 TRHP20396 242 aaPredicted RBP31.62■■■□□ 2.65
AGAP3-225ENST00000498559 CEP170Q5SW79 1584 aa31.62■■■□□ 2.65
AGAP3-225ENST00000498559 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
AGAP3-225ENST00000498559 ERCC6L2Q5T890 1561 aa31.47■■■□□ 2.63
AGAP3-225ENST00000498559 KIF27Q86VH2 1401 aa31.38■■■□□ 2.61
AGAP3-225ENST00000498559 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
AGAP3-225ENST00000498559 IGF1RP08069 1367 aa31.33■■■□□ 2.61
AGAP3-225ENST00000498559 CUL7Q14999 1698 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms