RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
KDM3A-215ENST00000498528 ABCC9O60706 1549 aa14.17□□□□□ -0.14
KDM3A-215ENST00000498528 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
KDM3A-215ENST00000498528 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
KDM3A-215ENST00000498528 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
KDM3A-215ENST00000498528 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
KDM3A-215ENST00000498528 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
KDM3A-215ENST00000498528 NACADO15069 1562 aa13.13□□□□□ -0.31
KDM3A-215ENST00000498528 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
KDM3A-215ENST00000498528 BICRAQ9NZM4 1560 aa12.92□□□□□ -0.34
KDM3A-215ENST00000498528 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
KDM3A-215ENST00000498528 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
KDM3A-215ENST00000498528 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
KDM3A-215ENST00000498528 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
KDM3A-215ENST00000498528 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
KDM3A-215ENST00000498528 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
KDM3A-215ENST00000498528 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
KDM3A-215ENST00000498528 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
KDM3A-215ENST00000498528 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
KDM3A-215ENST00000498528 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
KDM3A-215ENST00000498528 CUX2O14529 1486 aa12.24□□□□□ -0.45
KDM3A-215ENST00000498528 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
KDM3A-215ENST00000498528 NESP48681 1621 aa12.09□□□□□ -0.47
KDM3A-215ENST00000498528 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
KDM3A-215ENST00000498528 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
KDM3A-215ENST00000498528 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
KDM3A-215ENST00000498528 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
KDM3A-215ENST00000498528 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
KDM3A-215ENST00000498528 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
KDM3A-215ENST00000498528 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
KDM3A-215ENST00000498528 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
KDM3A-215ENST00000498528 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
KDM3A-215ENST00000498528 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
KDM3A-215ENST00000498528 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
KDM3A-215ENST00000498528 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
KDM3A-215ENST00000498528 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
KDM3A-215ENST00000498528 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
KDM3A-215ENST00000498528 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
KDM3A-215ENST00000498528 WDR62O43379 1518 aa11.74□□□□□ -0.53
KDM3A-215ENST00000498528 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
KDM3A-215ENST00000498528 WIZO95785 1651 aa11.7□□□□□ -0.54
KDM3A-215ENST00000498528 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
KDM3A-215ENST00000498528 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
KDM3A-215ENST00000498528 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 URB2Q14146 1524 aaKnown RBP11.56□□□□□ -0.56
KDM3A-215ENST00000498528 CFTRP13569 1480 aa11.54□□□□□ -0.56
KDM3A-215ENST00000498528 ARHGEF11O15085 1522 aa11.49□□□□□ -0.57
KDM3A-215ENST00000498528 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
KDM3A-215ENST00000498528 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
KDM3A-215ENST00000498528 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
KDM3A-215ENST00000498528 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
KDM3A-215ENST00000498528 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
KDM3A-215ENST00000498528 FBLN2P98095 1184 aa11.42□□□□□ -0.58
KDM3A-215ENST00000498528 CHD1O14646 1710 aa11.42□□□□□ -0.58
KDM3A-215ENST00000498528 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
KDM3A-215ENST00000498528 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
KDM3A-215ENST00000498528 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
KDM3A-215ENST00000498528 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
KDM3A-215ENST00000498528 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
KDM3A-215ENST00000498528 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
KDM3A-215ENST00000498528 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
KDM3A-215ENST00000498528 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
KDM3A-215ENST00000498528 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
KDM3A-215ENST00000498528 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
KDM3A-215ENST00000498528 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
KDM3A-215ENST00000498528 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
KDM3A-215ENST00000498528 CHMP7Q8WUX9 453 aaPredicted RBP11.23□□□□□ -0.61
KDM3A-215ENST00000498528 SOGA1O94964 1423 aa11.22□□□□□ -0.61
KDM3A-215ENST00000498528 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
KDM3A-215ENST00000498528 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
KDM3A-215ENST00000498528 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
KDM3A-215ENST00000498528 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
KDM3A-215ENST00000498528 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
KDM3A-215ENST00000498528 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
KDM3A-215ENST00000498528 CUX1P39880 1505 aa11.11□□□□□ -0.63
KDM3A-215ENST00000498528 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
KDM3A-215ENST00000498528 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
KDM3A-215ENST00000498528 GRIN2AQ12879 1464 aa11□□□□□ -0.65
KDM3A-215ENST00000498528 CEP170Q5SW79 1584 aa11□□□□□ -0.65
KDM3A-215ENST00000498528 KIF13AQ9H1H9 1805 aa10.99□□□□□ -0.65
KDM3A-215ENST00000498528 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
KDM3A-215ENST00000498528 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
KDM3A-215ENST00000498528 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
KDM3A-215ENST00000498528 NUP160Q12769 1436 aa10.92□□□□□ -0.66
KDM3A-215ENST00000498528 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
KDM3A-215ENST00000498528 FAM69CQ0P6D2 419 aa10.91□□□□□ -0.66
KDM3A-215ENST00000498528 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
KDM3A-215ENST00000498528 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
KDM3A-215ENST00000498528 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
KDM3A-215ENST00000498528 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
KDM3A-215ENST00000498528 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
KDM3A-215ENST00000498528 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms