RNA–Protein interactions for RNA: ENST00000498411.1

FLNA-217, Transcript of filamin A, humanhuman

TSL 3

Gene FLNA, Length 368 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLNA-217ENST00000498411 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
FLNA-217ENST00000498411 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
FLNA-217ENST00000498411 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
FLNA-217ENST00000498411 ABCC9O60706 1549 aa29.1■■■□□ 2.25
FLNA-217ENST00000498411 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
FLNA-217ENST00000498411 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
FLNA-217ENST00000498411 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
FLNA-217ENST00000498411 NACADO15069 1562 aa28.66■■■□□ 2.18
FLNA-217ENST00000498411 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
FLNA-217ENST00000498411 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
FLNA-217ENST00000498411 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
FLNA-217ENST00000498411 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
FLNA-217ENST00000498411 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
FLNA-217ENST00000498411 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
FLNA-217ENST00000498411 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
FLNA-217ENST00000498411 SUPT5HO00267 1087 aaKnown RBP27.11■■□□□ 1.93
FLNA-217ENST00000498411 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
FLNA-217ENST00000498411 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
FLNA-217ENST00000498411 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
FLNA-217ENST00000498411 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
FLNA-217ENST00000498411 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
FLNA-217ENST00000498411 WIZO95785 1651 aa26.73■■□□□ 1.87
FLNA-217ENST00000498411 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
FLNA-217ENST00000498411 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
FLNA-217ENST00000498411 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
FLNA-217ENST00000498411 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
FLNA-217ENST00000498411 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
FLNA-217ENST00000498411 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
FLNA-217ENST00000498411 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
FLNA-217ENST00000498411 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
FLNA-217ENST00000498411 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
FLNA-217ENST00000498411 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
FLNA-217ENST00000498411 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
FLNA-217ENST00000498411 CFTRP13569 1480 aa25.76■■□□□ 1.71
FLNA-217ENST00000498411 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
FLNA-217ENST00000498411 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
FLNA-217ENST00000498411 PRDM2Q13029 1718 aa25.59■■□□□ 1.69
FLNA-217ENST00000498411 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
FLNA-217ENST00000498411 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
FLNA-217ENST00000498411 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.673e-7■■□□□ 13.1
FLNA-217ENST00000498411 NESP48681 1621 aa25.45■■□□□ 1.67
FLNA-217ENST00000498411 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
FLNA-217ENST00000498411 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.66
FLNA-217ENST00000498411 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
FLNA-217ENST00000498411 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
FLNA-217ENST00000498411 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
FLNA-217ENST00000498411 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
FLNA-217ENST00000498411 CUX1P39880 1505 aa25.27■■□□□ 1.64
FLNA-217ENST00000498411 DNMBPQ6XZF7 1577 aa25.16■■□□□ 1.62
FLNA-217ENST00000498411 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
FLNA-217ENST00000498411 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
FLNA-217ENST00000498411 EEA1Q15075 1411 aa25.1■■□□□ 1.61
FLNA-217ENST00000498411 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
FLNA-217ENST00000498411 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
FLNA-217ENST00000498411 SOGA1O94964 1423 aa25.03■■□□□ 1.6
FLNA-217ENST00000498411 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
FLNA-217ENST00000498411 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
FLNA-217ENST00000498411 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
FLNA-217ENST00000498411 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
FLNA-217ENST00000498411 WDR62O43379 1518 aa24.91■■□□□ 1.58
FLNA-217ENST00000498411 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
FLNA-217ENST00000498411 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
FLNA-217ENST00000498411 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
FLNA-217ENST00000498411 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
FLNA-217ENST00000498411 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
FLNA-217ENST00000498411 CUX2O14529 1486 aa24.83■■□□□ 1.57
FLNA-217ENST00000498411 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
FLNA-217ENST00000498411 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
FLNA-217ENST00000498411 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
FLNA-217ENST00000498411 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
FLNA-217ENST00000498411 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
FLNA-217ENST00000498411 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
FLNA-217ENST00000498411 KIF21BO75037 1637 aa24.71■■□□□ 1.55
FLNA-217ENST00000498411 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
FLNA-217ENST00000498411 IGF1RP08069 1367 aa24.67■■□□□ 1.54
FLNA-217ENST00000498411 PRXQ9BXM0 1461 aa24.65■■□□□ 1.54
FLNA-217ENST00000498411 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
FLNA-217ENST00000498411 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
FLNA-217ENST00000498411 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
FLNA-217ENST00000498411 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
FLNA-217ENST00000498411 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
FLNA-217ENST00000498411 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
FLNA-217ENST00000498411 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
FLNA-217ENST00000498411 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
FLNA-217ENST00000498411 CUL7Q14999 1698 aa24.53■■□□□ 1.52
FLNA-217ENST00000498411 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
FLNA-217ENST00000498411 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.517e-7■■■■■ 40.1
FLNA-217ENST00000498411 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
FLNA-217ENST00000498411 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
FLNA-217ENST00000498411 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
FLNA-217ENST00000498411 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
FLNA-217ENST00000498411 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
FLNA-217ENST00000498411 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
FLNA-217ENST00000498411 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
FLNA-217ENST00000498411 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
FLNA-217ENST00000498411 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
FLNA-217ENST00000498411 CLIP1P30622 1438 aa24.25■■□□□ 1.47
FLNA-217ENST00000498411 SYNJ2O15056 1496 aa24.2■■□□□ 1.47
FLNA-217ENST00000498411 CTTNBP2Q8WZ74 1663 aa24.17■■□□□ 1.46
FLNA-217ENST00000498411 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms