RNA–Protein interactions for RNA: ENST00000498356.1

PGD-210, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 3

Gene PGD, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-210ENST00000498356 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
PGD-210ENST00000498356 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
PGD-210ENST00000498356 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
PGD-210ENST00000498356 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
PGD-210ENST00000498356 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
PGD-210ENST00000498356 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
PGD-210ENST00000498356 ABCC9O60706 1549 aa16.2■□□□□ 0.18
PGD-210ENST00000498356 FOXD1Q16676 465 aa15.79■□□□□ 0.12
PGD-210ENST00000498356 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
PGD-210ENST00000498356 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
PGD-210ENST00000498356 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
PGD-210ENST00000498356 ADRA2BP18089 450 aa15.48■□□□□ 0.07
PGD-210ENST00000498356 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
PGD-210ENST00000498356 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
PGD-210ENST00000498356 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
PGD-210ENST00000498356 NACADO15069 1562 aa14.92□□□□□ -0.02
PGD-210ENST00000498356 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
PGD-210ENST00000498356 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
PGD-210ENST00000498356 DNAJC5Q9H3Z4 198 aa14.72□□□□□ -0.05
PGD-210ENST00000498356 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
PGD-210ENST00000498356 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
PGD-210ENST00000498356 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
PGD-210ENST00000498356 KCNA4P22459 653 aa14.55□□□□□ -0.08
PGD-210ENST00000498356 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
PGD-210ENST00000498356 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
PGD-210ENST00000498356 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
PGD-210ENST00000498356 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
PGD-210ENST00000498356 MSH5O43196 834 aa14.38□□□□□ -0.11
PGD-210ENST00000498356 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
PGD-210ENST00000498356 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
PGD-210ENST00000498356 CUX2O14529 1486 aa14.15□□□□□ -0.14
PGD-210ENST00000498356 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
PGD-210ENST00000498356 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
PGD-210ENST00000498356 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
PGD-210ENST00000498356 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
PGD-210ENST00000498356 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
PGD-210ENST00000498356 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
PGD-210ENST00000498356 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
PGD-210ENST00000498356 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
PGD-210ENST00000498356 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
PGD-210ENST00000498356 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
PGD-210ENST00000498356 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
PGD-210ENST00000498356 NESP48681 1621 aa13.75□□□□□ -0.21
PGD-210ENST00000498356 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
PGD-210ENST00000498356 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
PGD-210ENST00000498356 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
PGD-210ENST00000498356 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
PGD-210ENST00000498356 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
PGD-210ENST00000498356 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
PGD-210ENST00000498356 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
PGD-210ENST00000498356 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
PGD-210ENST00000498356 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
PGD-210ENST00000498356 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
PGD-210ENST00000498356 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
PGD-210ENST00000498356 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
PGD-210ENST00000498356 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
PGD-210ENST00000498356 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
PGD-210ENST00000498356 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
PGD-210ENST00000498356 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
PGD-210ENST00000498356 ZBTB22O15209 634 aa13.4□□□□□ -0.26
PGD-210ENST00000498356 WDR62O43379 1518 aa13.39□□□□□ -0.27
PGD-210ENST00000498356 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
PGD-210ENST00000498356 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
PGD-210ENST00000498356 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
PGD-210ENST00000498356 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
PGD-210ENST00000498356 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
PGD-210ENST00000498356 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
PGD-210ENST00000498356 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
PGD-210ENST00000498356 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
PGD-210ENST00000498356 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
PGD-210ENST00000498356 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
PGD-210ENST00000498356 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
PGD-210ENST00000498356 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
PGD-210ENST00000498356 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
PGD-210ENST00000498356 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
PGD-210ENST00000498356 WIZO95785 1651 aa13.08□□□□□ -0.32
PGD-210ENST00000498356 CFTRP13569 1480 aa13.05□□□□□ -0.32
PGD-210ENST00000498356 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
PGD-210ENST00000498356 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
PGD-210ENST00000498356 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
PGD-210ENST00000498356 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
PGD-210ENST00000498356 FBLN2P98095 1184 aa12.99□□□□□ -0.33
PGD-210ENST00000498356 CHD1O14646 1710 aa12.99□□□□□ -0.33
PGD-210ENST00000498356 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
PGD-210ENST00000498356 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
PGD-210ENST00000498356 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
PGD-210ENST00000498356 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
PGD-210ENST00000498356 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
PGD-210ENST00000498356 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.35
PGD-210ENST00000498356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
PGD-210ENST00000498356 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
PGD-210ENST00000498356 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
PGD-210ENST00000498356 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
PGD-210ENST00000498356 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
PGD-210ENST00000498356 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
PGD-210ENST00000498356 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
PGD-210ENST00000498356 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
PGD-210ENST00000498356 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
PGD-210ENST00000498356 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
PGD-210ENST00000498356 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms