RNA–Protein interactions for RNA: ENST00000498169.1

PFN2-216, Transcript of profilin 2, humanhuman

TSL 2

Gene PFN2, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN2-216ENST00000498169 NISCHQ9Y2I1 1504 aa29.47■■■□□ 2.31
PFN2-216ENST00000498169 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
PFN2-216ENST00000498169 ABCC9O60706 1549 aa25.56■■□□□ 1.68
PFN2-216ENST00000498169 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
PFN2-216ENST00000498169 NACADO15069 1562 aa24.63■■□□□ 1.53
PFN2-216ENST00000498169 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
PFN2-216ENST00000498169 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
PFN2-216ENST00000498169 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
PFN2-216ENST00000498169 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
PFN2-216ENST00000498169 UNC13AQ9UPW8 1703 aa24.21■■□□□ 1.47
PFN2-216ENST00000498169 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.42
PFN2-216ENST00000498169 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
PFN2-216ENST00000498169 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
PFN2-216ENST00000498169 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
PFN2-216ENST00000498169 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
PFN2-216ENST00000498169 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
PFN2-216ENST00000498169 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
PFN2-216ENST00000498169 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
PFN2-216ENST00000498169 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
PFN2-216ENST00000498169 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
PFN2-216ENST00000498169 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
PFN2-216ENST00000498169 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
PFN2-216ENST00000498169 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
PFN2-216ENST00000498169 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
PFN2-216ENST00000498169 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
PFN2-216ENST00000498169 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
PFN2-216ENST00000498169 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
PFN2-216ENST00000498169 WIZO95785 1651 aa22.5■■□□□ 1.19
PFN2-216ENST00000498169 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
PFN2-216ENST00000498169 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
PFN2-216ENST00000498169 NESP48681 1621 aa22.15■■□□□ 1.14
PFN2-216ENST00000498169 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
PFN2-216ENST00000498169 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
PFN2-216ENST00000498169 ERCC6Q03468 1493 aa21.99■■□□□ 1.11
PFN2-216ENST00000498169 KIF21AQ7Z4S6 1674 aa21.96■■□□□ 1.11
PFN2-216ENST00000498169 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
PFN2-216ENST00000498169 CFTRP13569 1480 aa21.92■■□□□ 1.1
PFN2-216ENST00000498169 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
PFN2-216ENST00000498169 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
PFN2-216ENST00000498169 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
PFN2-216ENST00000498169 CUX2O14529 1486 aa21.82■■□□□ 1.08
PFN2-216ENST00000498169 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
PFN2-216ENST00000498169 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
PFN2-216ENST00000498169 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
PFN2-216ENST00000498169 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
PFN2-216ENST00000498169 WDR62O43379 1518 aa21.68■■□□□ 1.06
PFN2-216ENST00000498169 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
PFN2-216ENST00000498169 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
PFN2-216ENST00000498169 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
PFN2-216ENST00000498169 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
PFN2-216ENST00000498169 CUX1P39880 1505 aa21.3■■□□□ 1
PFN2-216ENST00000498169 IFT140Q96RY7 1462 aa21.3■■□□□ 1
PFN2-216ENST00000498169 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
PFN2-216ENST00000498169 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
PFN2-216ENST00000498169 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
PFN2-216ENST00000498169 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
PFN2-216ENST00000498169 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
PFN2-216ENST00000498169 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
PFN2-216ENST00000498169 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
PFN2-216ENST00000498169 SOGA1O94964 1423 aa21.15■□□□□ 0.98
PFN2-216ENST00000498169 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
PFN2-216ENST00000498169 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
PFN2-216ENST00000498169 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
PFN2-216ENST00000498169 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
PFN2-216ENST00000498169 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
PFN2-216ENST00000498169 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.965e-12■■■■■ 47.9
PFN2-216ENST00000498169 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
PFN2-216ENST00000498169 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
PFN2-216ENST00000498169 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
PFN2-216ENST00000498169 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
PFN2-216ENST00000498169 CHD1O14646 1710 aa20.92■□□□□ 0.94
PFN2-216ENST00000498169 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
PFN2-216ENST00000498169 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
PFN2-216ENST00000498169 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
PFN2-216ENST00000498169 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
PFN2-216ENST00000498169 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
PFN2-216ENST00000498169 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
PFN2-216ENST00000498169 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PFN2-216ENST00000498169 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
PFN2-216ENST00000498169 FBLN2P98095 1184 aa20.72■□□□□ 0.91
PFN2-216ENST00000498169 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
PFN2-216ENST00000498169 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
PFN2-216ENST00000498169 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
PFN2-216ENST00000498169 CLASP1Q7Z460 1538 aa20.67■□□□□ 0.9
PFN2-216ENST00000498169 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
PFN2-216ENST00000498169 IGF1RP08069 1367 aa20.61■□□□□ 0.89
PFN2-216ENST00000498169 CUL7Q14999 1698 aa20.61■□□□□ 0.89
PFN2-216ENST00000498169 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
PFN2-216ENST00000498169 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
PFN2-216ENST00000498169 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
PFN2-216ENST00000498169 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
PFN2-216ENST00000498169 NUP160Q12769 1436 aa20.58■□□□□ 0.88
PFN2-216ENST00000498169 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
PFN2-216ENST00000498169 ARHGEF11O15085 1522 aa20.58■□□□□ 0.88
PFN2-216ENST00000498169 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
PFN2-216ENST00000498169 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
PFN2-216ENST00000498169 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
PFN2-216ENST00000498169 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
PFN2-216ENST00000498169 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
PFN2-216ENST00000498169 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms