RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
CAPN2-212ENST00000498027 AEBP2Q6ZN18 517 aaPredicted RBP32.44■■■□□ 2.78
CAPN2-212ENST00000498027 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
CAPN2-212ENST00000498027 CHIC1Q5VXU3 224 aa30.51■■■□□ 2.47
CAPN2-212ENST00000498027 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
CAPN2-212ENST00000498027 ABCC9O60706 1549 aa29.36■■■□□ 2.29
CAPN2-212ENST00000498027 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
CAPN2-212ENST00000498027 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
CAPN2-212ENST00000498027 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
CAPN2-212ENST00000498027 NACADO15069 1562 aa28.94■■■□□ 2.22
CAPN2-212ENST00000498027 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.19
CAPN2-212ENST00000498027 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
CAPN2-212ENST00000498027 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
CAPN2-212ENST00000498027 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
CAPN2-212ENST00000498027 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
CAPN2-212ENST00000498027 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
CAPN2-212ENST00000498027 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
CAPN2-212ENST00000498027 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
CAPN2-212ENST00000498027 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
CAPN2-212ENST00000498027 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
CAPN2-212ENST00000498027 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
CAPN2-212ENST00000498027 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
CAPN2-212ENST00000498027 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
CAPN2-212ENST00000498027 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
CAPN2-212ENST00000498027 WIZO95785 1651 aa26.98■■□□□ 1.91
CAPN2-212ENST00000498027 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
CAPN2-212ENST00000498027 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
CAPN2-212ENST00000498027 SMARCA2P51531 1590 aa26.87■■□□□ 1.89
CAPN2-212ENST00000498027 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
CAPN2-212ENST00000498027 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
CAPN2-212ENST00000498027 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
CAPN2-212ENST00000498027 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
CAPN2-212ENST00000498027 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
CAPN2-212ENST00000498027 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
CAPN2-212ENST00000498027 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
CAPN2-212ENST00000498027 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
CAPN2-212ENST00000498027 CFTRP13569 1480 aa26.03■■□□□ 1.76
CAPN2-212ENST00000498027 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
CAPN2-212ENST00000498027 FOXD1Q16676 465 aa25.88■■□□□ 1.73
CAPN2-212ENST00000498027 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
CAPN2-212ENST00000498027 LAMC3Q9Y6N6 1575 aa25.81■■□□□ 1.72
CAPN2-212ENST00000498027 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
CAPN2-212ENST00000498027 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
CAPN2-212ENST00000498027 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
CAPN2-212ENST00000498027 NESP48681 1621 aa25.69■■□□□ 1.7
CAPN2-212ENST00000498027 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
CAPN2-212ENST00000498027 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
CAPN2-212ENST00000498027 SYNJ1O43426 1573 aa25.58■■□□□ 1.69
CAPN2-212ENST00000498027 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
CAPN2-212ENST00000498027 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
CAPN2-212ENST00000498027 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
CAPN2-212ENST00000498027 CUX1P39880 1505 aa25.52■■□□□ 1.68
CAPN2-212ENST00000498027 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
CAPN2-212ENST00000498027 EEA1Q15075 1411 aa25.39■■□□□ 1.65
CAPN2-212ENST00000498027 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
CAPN2-212ENST00000498027 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
CAPN2-212ENST00000498027 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
CAPN2-212ENST00000498027 SOGA1O94964 1423 aa25.3■■□□□ 1.64
CAPN2-212ENST00000498027 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
CAPN2-212ENST00000498027 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
CAPN2-212ENST00000498027 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
CAPN2-212ENST00000498027 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
CAPN2-212ENST00000498027 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
CAPN2-212ENST00000498027 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
CAPN2-212ENST00000498027 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
CAPN2-212ENST00000498027 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
CAPN2-212ENST00000498027 WDR62O43379 1518 aa25.16■■□□□ 1.62
CAPN2-212ENST00000498027 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
CAPN2-212ENST00000498027 CUX2O14529 1486 aa25.09■■□□□ 1.61
CAPN2-212ENST00000498027 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
CAPN2-212ENST00000498027 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
CAPN2-212ENST00000498027 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
CAPN2-212ENST00000498027 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
CAPN2-212ENST00000498027 KIF21BO75037 1637 aa24.97■■□□□ 1.59
CAPN2-212ENST00000498027 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
CAPN2-212ENST00000498027 WDR97A6NE52 1622 aa24.96■■□□□ 1.59
CAPN2-212ENST00000498027 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
CAPN2-212ENST00000498027 IGF1RP08069 1367 aa24.93■■□□□ 1.58
CAPN2-212ENST00000498027 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
CAPN2-212ENST00000498027 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
CAPN2-212ENST00000498027 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
CAPN2-212ENST00000498027 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
CAPN2-212ENST00000498027 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
CAPN2-212ENST00000498027 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
CAPN2-212ENST00000498027 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
CAPN2-212ENST00000498027 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
CAPN2-212ENST00000498027 CARMIL1Q5VZK9 1371 aa24.81■■□□□ 1.56
CAPN2-212ENST00000498027 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
CAPN2-212ENST00000498027 CUL7Q14999 1698 aa24.76■■□□□ 1.55
CAPN2-212ENST00000498027 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.559e-11■■□□□ 12.6
CAPN2-212ENST00000498027 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
CAPN2-212ENST00000498027 ZNF608Q9ULD9 1512 aaPredicted RBP24.72■■□□□ 1.55
CAPN2-212ENST00000498027 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
CAPN2-212ENST00000498027 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
CAPN2-212ENST00000498027 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
CAPN2-212ENST00000498027 CEP162Q5TB80 1403 aa24.63■■□□□ 1.53
CAPN2-212ENST00000498027 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
CAPN2-212ENST00000498027 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
CAPN2-212ENST00000498027 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
CAPN2-212ENST00000498027 CLIP1P30622 1438 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms