RNA–Protein interactions for RNA: ENST00000497952.5

HDAC10-220, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-220ENST00000497952 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
HDAC10-220ENST00000497952 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
HDAC10-220ENST00000497952 ABCC9O60706 1549 aa24.22■■□□□ 1.47
HDAC10-220ENST00000497952 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
HDAC10-220ENST00000497952 NACADO15069 1562 aa22.89■■□□□ 1.26
HDAC10-220ENST00000497952 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
HDAC10-220ENST00000497952 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
HDAC10-220ENST00000497952 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
HDAC10-220ENST00000497952 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
HDAC10-220ENST00000497952 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.28e-8■■□□□ 13.3
HDAC10-220ENST00000497952 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
HDAC10-220ENST00000497952 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
HDAC10-220ENST00000497952 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
HDAC10-220ENST00000497952 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
HDAC10-220ENST00000497952 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
HDAC10-220ENST00000497952 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
HDAC10-220ENST00000497952 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
HDAC10-220ENST00000497952 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
HDAC10-220ENST00000497952 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
HDAC10-220ENST00000497952 NCAPD3P42695 1498 aa21.09■□□□□ 0.97
HDAC10-220ENST00000497952 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
HDAC10-220ENST00000497952 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
HDAC10-220ENST00000497952 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
HDAC10-220ENST00000497952 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
HDAC10-220ENST00000497952 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
HDAC10-220ENST00000497952 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
HDAC10-220ENST00000497952 PEG3Q9GZU2 1588 aa20.87■□□□□ 0.93
HDAC10-220ENST00000497952 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
HDAC10-220ENST00000497952 NESP48681 1621 aa20.82■□□□□ 0.92
HDAC10-220ENST00000497952 CUX2O14529 1486 aa20.81■□□□□ 0.92
HDAC10-220ENST00000497952 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
HDAC10-220ENST00000497952 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
HDAC10-220ENST00000497952 WIZO95785 1651 aa20.67■□□□□ 0.9
HDAC10-220ENST00000497952 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
HDAC10-220ENST00000497952 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
HDAC10-220ENST00000497952 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
HDAC10-220ENST00000497952 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
HDAC10-220ENST00000497952 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
HDAC10-220ENST00000497952 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
HDAC10-220ENST00000497952 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
HDAC10-220ENST00000497952 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
HDAC10-220ENST00000497952 WDR62O43379 1518 aa20.31■□□□□ 0.84
HDAC10-220ENST00000497952 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
HDAC10-220ENST00000497952 CFTRP13569 1480 aa20.25■□□□□ 0.83
HDAC10-220ENST00000497952 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
HDAC10-220ENST00000497952 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
HDAC10-220ENST00000497952 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
HDAC10-220ENST00000497952 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
HDAC10-220ENST00000497952 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
HDAC10-220ENST00000497952 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
HDAC10-220ENST00000497952 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
HDAC10-220ENST00000497952 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
HDAC10-220ENST00000497952 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
HDAC10-220ENST00000497952 ABCC8Q09428 1581 aa19.83■□□□□ 0.77
HDAC10-220ENST00000497952 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
HDAC10-220ENST00000497952 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
HDAC10-220ENST00000497952 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
HDAC10-220ENST00000497952 CHD1O14646 1710 aa19.69■□□□□ 0.74
HDAC10-220ENST00000497952 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.745e-7■■■□□ 15.8
HDAC10-220ENST00000497952 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
HDAC10-220ENST00000497952 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
HDAC10-220ENST00000497952 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
HDAC10-220ENST00000497952 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
HDAC10-220ENST00000497952 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
HDAC10-220ENST00000497952 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
HDAC10-220ENST00000497952 CUX1P39880 1505 aa19.6■□□□□ 0.73
HDAC10-220ENST00000497952 SOGA1O94964 1423 aa19.59■□□□□ 0.73
HDAC10-220ENST00000497952 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
HDAC10-220ENST00000497952 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
HDAC10-220ENST00000497952 FBLN2P98095 1184 aa19.55■□□□□ 0.72
HDAC10-220ENST00000497952 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
HDAC10-220ENST00000497952 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
HDAC10-220ENST00000497952 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
HDAC10-220ENST00000497952 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
HDAC10-220ENST00000497952 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
HDAC10-220ENST00000497952 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
HDAC10-220ENST00000497952 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
HDAC10-220ENST00000497952 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
HDAC10-220ENST00000497952 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
HDAC10-220ENST00000497952 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
HDAC10-220ENST00000497952 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
HDAC10-220ENST00000497952 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
HDAC10-220ENST00000497952 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
HDAC10-220ENST00000497952 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
HDAC10-220ENST00000497952 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
HDAC10-220ENST00000497952 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
HDAC10-220ENST00000497952 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
HDAC10-220ENST00000497952 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
HDAC10-220ENST00000497952 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
HDAC10-220ENST00000497952 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
HDAC10-220ENST00000497952 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
HDAC10-220ENST00000497952 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
HDAC10-220ENST00000497952 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
HDAC10-220ENST00000497952 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
HDAC10-220ENST00000497952 NUP160Q12769 1436 aa19.1■□□□□ 0.65
HDAC10-220ENST00000497952 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
HDAC10-220ENST00000497952 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
HDAC10-220ENST00000497952 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
HDAC10-220ENST00000497952 CUL7Q14999 1698 aa18.91■□□□□ 0.62
HDAC10-220ENST00000497952 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms