RNA–Protein interactions for RNA: ENST00000497752.6

CD99-209, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 2

Gene CD99, Length 806 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-209ENST00000497752 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
CD99-209ENST00000497752 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
CD99-209ENST00000497752 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
CD99-209ENST00000497752 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
CD99-209ENST00000497752 ABCC9O60706 1549 aa23.56■■□□□ 1.36
CD99-209ENST00000497752 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
CD99-209ENST00000497752 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
CD99-209ENST00000497752 NACADO15069 1562 aa22.52■■□□□ 1.2
CD99-209ENST00000497752 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
CD99-209ENST00000497752 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
CD99-209ENST00000497752 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
CD99-209ENST00000497752 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
CD99-209ENST00000497752 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
CD99-209ENST00000497752 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
CD99-209ENST00000497752 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
CD99-209ENST00000497752 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
CD99-209ENST00000497752 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
CD99-209ENST00000497752 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
CD99-209ENST00000497752 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
CD99-209ENST00000497752 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
CD99-209ENST00000497752 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
CD99-209ENST00000497752 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
CD99-209ENST00000497752 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
CD99-209ENST00000497752 ATAD2BQ9ULI0 1458 aa20.83■□□□□ 0.93
CD99-209ENST00000497752 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
CD99-209ENST00000497752 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
CD99-209ENST00000497752 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
CD99-209ENST00000497752 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
CD99-209ENST00000497752 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
CD99-209ENST00000497752 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
CD99-209ENST00000497752 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
CD99-209ENST00000497752 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
CD99-209ENST00000497752 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
CD99-209ENST00000497752 WIZO95785 1651 aa20.45■□□□□ 0.86
CD99-209ENST00000497752 FOXD1Q16676 465 aa20.39■□□□□ 0.85
CD99-209ENST00000497752 NESP48681 1621 aa20.35■□□□□ 0.85
CD99-209ENST00000497752 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
CD99-209ENST00000497752 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
CD99-209ENST00000497752 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
CD99-209ENST00000497752 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
CD99-209ENST00000497752 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
CD99-209ENST00000497752 CUX2O14529 1486 aa20.11■□□□□ 0.81
CD99-209ENST00000497752 CFTRP13569 1480 aa20.09■□□□□ 0.81
CD99-209ENST00000497752 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
CD99-209ENST00000497752 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
CD99-209ENST00000497752 FANCD2Q9BXW9 1451 aa19.98■□□□□ 0.79
CD99-209ENST00000497752 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
CD99-209ENST00000497752 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
CD99-209ENST00000497752 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
CD99-209ENST00000497752 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
CD99-209ENST00000497752 WDR62O43379 1518 aa19.84■□□□□ 0.77
CD99-209ENST00000497752 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
CD99-209ENST00000497752 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
CD99-209ENST00000497752 ADRA2BP18089 450 aa19.74■□□□□ 0.75
CD99-209ENST00000497752 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
CD99-209ENST00000497752 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
CD99-209ENST00000497752 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
CD99-209ENST00000497752 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
CD99-209ENST00000497752 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
CD99-209ENST00000497752 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
CD99-209ENST00000497752 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
CD99-209ENST00000497752 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
CD99-209ENST00000497752 SOGA1O94964 1423 aa19.44■□□□□ 0.7
CD99-209ENST00000497752 CUX1P39880 1505 aa19.44■□□□□ 0.7
CD99-209ENST00000497752 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
CD99-209ENST00000497752 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
CD99-209ENST00000497752 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
CD99-209ENST00000497752 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.69
CD99-209ENST00000497752 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
CD99-209ENST00000497752 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
CD99-209ENST00000497752 PIAS4Q8N2W9 510 aaPredicted RBP19.32■□□□□ 0.68
CD99-209ENST00000497752 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
CD99-209ENST00000497752 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
CD99-209ENST00000497752 FBLN2P98095 1184 aa19.22■□□□□ 0.67
CD99-209ENST00000497752 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
CD99-209ENST00000497752 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
CD99-209ENST00000497752 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
CD99-209ENST00000497752 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
CD99-209ENST00000497752 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
CD99-209ENST00000497752 GAPVD1Q14C86 1478 aa19.18■□□□□ 0.66
CD99-209ENST00000497752 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
CD99-209ENST00000497752 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
CD99-209ENST00000497752 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
CD99-209ENST00000497752 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
CD99-209ENST00000497752 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
CD99-209ENST00000497752 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
CD99-209ENST00000497752 CHD1O14646 1710 aa19.03■□□□□ 0.64
CD99-209ENST00000497752 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
CD99-209ENST00000497752 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
CD99-209ENST00000497752 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
CD99-209ENST00000497752 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
CD99-209ENST00000497752 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
CD99-209ENST00000497752 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
CD99-209ENST00000497752 IGF1RP08069 1367 aa18.93■□□□□ 0.62
CD99-209ENST00000497752 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
CD99-209ENST00000497752 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
CD99-209ENST00000497752 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
CD99-209ENST00000497752 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
CD99-209ENST00000497752 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
CD99-209ENST00000497752 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms