RNA–Protein interactions for RNA: ENST00000497617.1

TSFM-206, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3

Gene TSFM, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-206ENST00000497617 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
TSFM-206ENST00000497617 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
TSFM-206ENST00000497617 ABCC9O60706 1549 aa29.1■■■□□ 2.25
TSFM-206ENST00000497617 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
TSFM-206ENST00000497617 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
TSFM-206ENST00000497617 NACADO15069 1562 aa27.66■■■□□ 2.02
TSFM-206ENST00000497617 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
TSFM-206ENST00000497617 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
TSFM-206ENST00000497617 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
TSFM-206ENST00000497617 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
TSFM-206ENST00000497617 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
TSFM-206ENST00000497617 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
TSFM-206ENST00000497617 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
TSFM-206ENST00000497617 SCRIBQ14160 1630 aa26.86■■□□□ 1.89
TSFM-206ENST00000497617 SHROOM4Q9ULL8 1493 aa26.58■■□□□ 1.85
TSFM-206ENST00000497617 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
TSFM-206ENST00000497617 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
TSFM-206ENST00000497617 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
TSFM-206ENST00000497617 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
TSFM-206ENST00000497617 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
TSFM-206ENST00000497617 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
TSFM-206ENST00000497617 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
TSFM-206ENST00000497617 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
TSFM-206ENST00000497617 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
TSFM-206ENST00000497617 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
TSFM-206ENST00000497617 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
TSFM-206ENST00000497617 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
TSFM-206ENST00000497617 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
TSFM-206ENST00000497617 WIZO95785 1651 aa25.09■■□□□ 1.61
TSFM-206ENST00000497617 NESP48681 1621 aa25.05■■□□□ 1.6
TSFM-206ENST00000497617 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
TSFM-206ENST00000497617 CUX2O14529 1486 aa24.89■■□□□ 1.58
TSFM-206ENST00000497617 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
TSFM-206ENST00000497617 KIF21AQ7Z4S6 1674 aa24.84■■□□□ 1.57
TSFM-206ENST00000497617 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
TSFM-206ENST00000497617 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
TSFM-206ENST00000497617 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
TSFM-206ENST00000497617 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
TSFM-206ENST00000497617 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
TSFM-206ENST00000497617 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
TSFM-206ENST00000497617 CFTRP13569 1480 aa24.51■■□□□ 1.51
TSFM-206ENST00000497617 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
TSFM-206ENST00000497617 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
TSFM-206ENST00000497617 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
TSFM-206ENST00000497617 WDR62O43379 1518 aa24.45■■□□□ 1.51
TSFM-206ENST00000497617 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
TSFM-206ENST00000497617 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
TSFM-206ENST00000497617 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
TSFM-206ENST00000497617 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
TSFM-206ENST00000497617 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
TSFM-206ENST00000497617 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
TSFM-206ENST00000497617 IFT140Q96RY7 1462 aa24■■□□□ 1.43
TSFM-206ENST00000497617 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
TSFM-206ENST00000497617 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
TSFM-206ENST00000497617 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
TSFM-206ENST00000497617 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
TSFM-206ENST00000497617 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
TSFM-206ENST00000497617 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
TSFM-206ENST00000497617 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
TSFM-206ENST00000497617 CUX1P39880 1505 aa23.76■■□□□ 1.39
TSFM-206ENST00000497617 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.391e-6■■■■■ 37.7
TSFM-206ENST00000497617 SOGA1O94964 1423 aa23.75■■□□□ 1.39
TSFM-206ENST00000497617 CHD1O14646 1710 aa23.7■■□□□ 1.39
TSFM-206ENST00000497617 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
TSFM-206ENST00000497617 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
TSFM-206ENST00000497617 FBLN2P98095 1184 aa23.64■■□□□ 1.37
TSFM-206ENST00000497617 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
TSFM-206ENST00000497617 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
TSFM-206ENST00000497617 PBRM1Q86U86 1689 aa23.55■■□□□ 1.36
TSFM-206ENST00000497617 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
TSFM-206ENST00000497617 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
TSFM-206ENST00000497617 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
TSFM-206ENST00000497617 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
TSFM-206ENST00000497617 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
TSFM-206ENST00000497617 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
TSFM-206ENST00000497617 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
TSFM-206ENST00000497617 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
TSFM-206ENST00000497617 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
TSFM-206ENST00000497617 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
TSFM-206ENST00000497617 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
TSFM-206ENST00000497617 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
TSFM-206ENST00000497617 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
TSFM-206ENST00000497617 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
TSFM-206ENST00000497617 SYNJ2O15056 1496 aa23.39■■□□□ 1.34
TSFM-206ENST00000497617 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
TSFM-206ENST00000497617 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
TSFM-206ENST00000497617 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
TSFM-206ENST00000497617 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
TSFM-206ENST00000497617 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
TSFM-206ENST00000497617 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
TSFM-206ENST00000497617 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
TSFM-206ENST00000497617 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
TSFM-206ENST00000497617 NUP160Q12769 1436 aa23.06■■□□□ 1.28
TSFM-206ENST00000497617 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
TSFM-206ENST00000497617 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
TSFM-206ENST00000497617 CUL7Q14999 1698 aa23■■□□□ 1.27
TSFM-206ENST00000497617 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
TSFM-206ENST00000497617 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
TSFM-206ENST00000497617 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
TSFM-206ENST00000497617 IGF1RP08069 1367 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms