RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
USP13-205ENST00000497380 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
USP13-205ENST00000497380 ABCC9O60706 1549 aa20.69■□□□□ 0.9
USP13-205ENST00000497380 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
USP13-205ENST00000497380 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
USP13-205ENST00000497380 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
USP13-205ENST00000497380 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
USP13-205ENST00000497380 NACADO15069 1562 aa20.18■□□□□ 0.82
USP13-205ENST00000497380 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
USP13-205ENST00000497380 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
USP13-205ENST00000497380 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
USP13-205ENST00000497380 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
USP13-205ENST00000497380 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
USP13-205ENST00000497380 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP13-205ENST00000497380 BICRAQ9NZM4 1560 aa19.39■□□□□ 0.69
USP13-205ENST00000497380 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
USP13-205ENST00000497380 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
USP13-205ENST00000497380 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
USP13-205ENST00000497380 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
USP13-205ENST00000497380 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
USP13-205ENST00000497380 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
USP13-205ENST00000497380 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
USP13-205ENST00000497380 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
USP13-205ENST00000497380 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
USP13-205ENST00000497380 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
USP13-205ENST00000497380 SUPT5HO00267 1087 aaKnown RBP18.67■□□□□ 0.58
USP13-205ENST00000497380 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
USP13-205ENST00000497380 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
USP13-205ENST00000497380 WIZO95785 1651 aa18.61■□□□□ 0.57
USP13-205ENST00000497380 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
USP13-205ENST00000497380 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
USP13-205ENST00000497380 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
USP13-205ENST00000497380 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
USP13-205ENST00000497380 CUX2O14529 1486 aa18.17■□□□□ 0.5
USP13-205ENST00000497380 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
USP13-205ENST00000497380 CFTRP13569 1480 aa18.07■□□□□ 0.48
USP13-205ENST00000497380 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
USP13-205ENST00000497380 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
USP13-205ENST00000497380 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
USP13-205ENST00000497380 NESP48681 1621 aa17.96■□□□□ 0.47
USP13-205ENST00000497380 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
USP13-205ENST00000497380 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
USP13-205ENST00000497380 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
USP13-205ENST00000497380 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
USP13-205ENST00000497380 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
USP13-205ENST00000497380 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
USP13-205ENST00000497380 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
USP13-205ENST00000497380 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
USP13-205ENST00000497380 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
USP13-205ENST00000497380 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
USP13-205ENST00000497380 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
USP13-205ENST00000497380 CUX1P39880 1505 aa17.62■□□□□ 0.41
USP13-205ENST00000497380 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
USP13-205ENST00000497380 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
USP13-205ENST00000497380 WDR62O43379 1518 aa17.6■□□□□ 0.41
USP13-205ENST00000497380 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
USP13-205ENST00000497380 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
USP13-205ENST00000497380 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
USP13-205ENST00000497380 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
USP13-205ENST00000497380 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
USP13-205ENST00000497380 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
USP13-205ENST00000497380 SOGA1O94964 1423 aa17.48■□□□□ 0.39
USP13-205ENST00000497380 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
USP13-205ENST00000497380 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
USP13-205ENST00000497380 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
USP13-205ENST00000497380 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
USP13-205ENST00000497380 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
USP13-205ENST00000497380 EEA1Q15075 1411 aa17.34■□□□□ 0.37
USP13-205ENST00000497380 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
USP13-205ENST00000497380 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
USP13-205ENST00000497380 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
USP13-205ENST00000497380 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
USP13-205ENST00000497380 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP13-205ENST00000497380 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
USP13-205ENST00000497380 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
USP13-205ENST00000497380 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
USP13-205ENST00000497380 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
USP13-205ENST00000497380 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
USP13-205ENST00000497380 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
USP13-205ENST00000497380 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.34
USP13-205ENST00000497380 IGF1RP08069 1367 aa17.19■□□□□ 0.34
USP13-205ENST00000497380 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
USP13-205ENST00000497380 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
USP13-205ENST00000497380 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
USP13-205ENST00000497380 CUL7Q14999 1698 aa17.13■□□□□ 0.33
USP13-205ENST00000497380 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
USP13-205ENST00000497380 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
USP13-205ENST00000497380 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
USP13-205ENST00000497380 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
USP13-205ENST00000497380 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
USP13-205ENST00000497380 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
USP13-205ENST00000497380 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
USP13-205ENST00000497380 KIF21BO75037 1637 aa17.04■□□□□ 0.32
USP13-205ENST00000497380 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
USP13-205ENST00000497380 FBLN2P98095 1184 aa17.03■□□□□ 0.32
USP13-205ENST00000497380 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
USP13-205ENST00000497380 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
USP13-205ENST00000497380 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
USP13-205ENST00000497380 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
USP13-205ENST00000497380 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 561.9 ms