RNA–Protein interactions for RNA: ENST00000496954.2

CLASP2-223, Transcript of cytoplasmic linker associated protein 2, human

TSL 4

Gene CLASP2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP2-223	ENST00000496954	NISCH	Q9Y2I1	1504 aa		39.3	■■■■□ 3.88
CLASP2-223	ENST00000496954	CCDC180	Q9P1Z9	1646 aa		34.94	■■■■□ 3.18
CLASP2-223	ENST00000496954	ABCC9	O60706	1549 aa		34.16	■■■■□ 3.06
CLASP2-223	ENST00000496954	RB1CC1	Q8TDY2	1594 aa		32.92	■■■□□ 2.86
CLASP2-223	ENST00000496954	NACAD	O15069	1562 aa		32.9	■■■□□ 2.86
CLASP2-223	ENST00000496954	DCAF8L2	P0C7V8	631 aa		32.81	■■■□□ 2.84
CLASP2-223	ENST00000496954	MYO15B	Q96JP2	1530 aa		32.76	■■■□□ 2.83
CLASP2-223	ENST00000496954	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.71	■■■□□ 2.83
CLASP2-223	ENST00000496954	DCAF1	Q9Y4B6	1507 aa		32.58	■■■□□ 2.81
CLASP2-223	ENST00000496954	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.08	■■■□□ 2.73
CLASP2-223	ENST00000496954	UNC13A	Q9UPW8	1703 aa		32.05	■■■□□ 2.72
CLASP2-223	ENST00000496954	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.93	■■■□□ 2.7
CLASP2-223	ENST00000496954	BICRA	Q9NZM4	1560 aa		31.87	■■■□□ 2.69
CLASP2-223	ENST00000496954	SCRIB	Q14160	1630 aa		31.79	■■■□□ 2.68
CLASP2-223	ENST00000496954	SHROOM4	Q9ULL8	1493 aa		31.67	■■■□□ 2.66
CLASP2-223	ENST00000496954	DNAJC5B	Q9UF47	199 aa		31.4	■■■□□ 2.62
CLASP2-223	ENST00000496954	EIF4G1	Q04637	1599 aa	Known RBP	31.05	■■■□□ 2.56
CLASP2-223	ENST00000496954	CC2D2A	Q9P2K1	1620 aa		30.91	■■■□□ 2.54
CLASP2-223	ENST00000496954	CECR2	Q9BXF3	1484 aa		30.75	■■■□□ 2.51
CLASP2-223	ENST00000496954	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.47	■■■□□ 2.47
CLASP2-223	ENST00000496954	CHIC1	Q5VXU3	224 aa		30.47	■■■□□ 2.47
CLASP2-223	ENST00000496954	SMARCA4	P51532	1647 aa		30.46	■■■□□ 2.47
CLASP2-223	ENST00000496954	NCAPD3	P42695	1498 aa		30.38	■■■□□ 2.45
CLASP2-223	ENST00000496954	ATAD2B	Q9ULI0	1458 aa		30.35	■■■□□ 2.45
CLASP2-223	ENST00000496954	SMARCA2	P51531	1590 aa		30.33	■■■□□ 2.45
CLASP2-223	ENST00000496954	MROH2B	Q7Z745	1585 aa		30.24	■■■□□ 2.43
CLASP2-223	ENST00000496954	PEG3	Q9GZU2	1588 aa		30.22	■■■□□ 2.43
CLASP2-223	ENST00000496954	HMGXB3	Q12766	1538 aa		30.19	■■■□□ 2.42
CLASP2-223	ENST00000496954	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.08	■■■□□ 2.41
CLASP2-223	ENST00000496954	RSF1	Q96T23	1441 aa	Predicted RBP	29.92	■■■□□ 2.38
CLASP2-223	ENST00000496954	WIZ	O95785	1651 aa		29.88	■■■□□ 2.37
CLASP2-223	ENST00000496954	TOP2A	P11388	1531 aa	Known RBP	29.61	■■■□□ 2.33
CLASP2-223	ENST00000496954	LAMC3	Q9Y6N6	1575 aa		29.55	■■■□□ 2.32
CLASP2-223	ENST00000496954	NES	P48681	1621 aa		29.53	■■■□□ 2.32
CLASP2-223	ENST00000496954	ERCC6	Q03468	1493 aa		29.49	■■■□□ 2.31
CLASP2-223	ENST00000496954	CADPS	Q9ULU8	1353 aa		29.49	■■■□□ 2.31
CLASP2-223	ENST00000496954	PDS5B	Q9NTI5	1447 aa		29.4	■■■□□ 2.3
CLASP2-223	ENST00000496954	CFTR	P13569	1480 aa		29.29	■■■□□ 2.28
CLASP2-223	ENST00000496954	CCDC88B	A6NC98	1476 aa		29.28	■■■□□ 2.28
CLASP2-223	ENST00000496954	CUX2	O14529	1486 aa		29.25	■■■□□ 2.27
CLASP2-223	ENST00000496954	KIF21A	Q7Z4S6	1674 aa		29.16	■■■□□ 2.26
CLASP2-223	ENST00000496954	THOC2	Q8NI27	1593 aa	Known RBP	29.11	■■■□□ 2.25
CLASP2-223	ENST00000496954	SUPT5H	O00267	1087 aa	Known RBP	29.1	■■■□□ 2.25
CLASP2-223	ENST00000496954	FANCD2	Q9BXW9	1451 aa		29.1	■■■□□ 2.25
CLASP2-223	ENST00000496954	CEP164	Q9UPV0	1460 aa		29.07	■■■□□ 2.24
CLASP2-223	ENST00000496954	MRC2	Q9UBG0	1479 aa		29.04	■■■□□ 2.24
CLASP2-223	ENST00000496954	PRDM2	Q13029	1718 aa		28.98	■■■□□ 2.23
CLASP2-223	ENST00000496954	WDR62	O43379	1518 aa		28.93	■■■□□ 2.22
CLASP2-223	ENST00000496954	URB2	Q14146	1524 aa	Known RBP	28.78	■■■□□ 2.2
CLASP2-223	ENST00000496954	ABCC8	Q09428	1581 aa		28.71	■■■□□ 2.19
CLASP2-223	ENST00000496954	TOPBP1	Q92547	1522 aa		28.62	■■■□□ 2.17
CLASP2-223	ENST00000496954	DNMBP	Q6XZF7	1577 aa		28.58	■■■□□ 2.17
CLASP2-223	ENST00000496954	IFT140	Q96RY7	1462 aa		28.49	■■■□□ 2.15
CLASP2-223	ENST00000496954	DNAJC5	Q9H3Z4	198 aa		28.4	■■■□□ 2.14
CLASP2-223	ENST00000496954	POLA1	P09884	1462 aa	Predicted RBP	28.37	■■■□□ 2.13
CLASP2-223	ENST00000496954	CUX1	P39880	1505 aa		28.37	■■■□□ 2.13
CLASP2-223	ENST00000496954	SOGA1	O94964	1423 aa		28.3	■■■□□ 2.12
CLASP2-223	ENST00000496954	TARBP1	Q13395	1621 aa	Known RBP	28.29	■■■□□ 2.12
CLASP2-223	ENST00000496954	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.28	■■■□□ 2.12
CLASP2-223	ENST00000496954	FGD5	Q6ZNL6	1462 aa		28.28	■■■□□ 2.12
CLASP2-223	ENST00000496954	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.22	■■■□□ 2.11
CLASP2-223	ENST00000496954	RAD54L2	Q9Y4B4	1467 aa		28.21	■■■□□ 2.11
CLASP2-223	ENST00000496954	EIF4G3	O43432	1585 aa	Known RBP	28.16	■■■□□ 2.1
CLASP2-223	ENST00000496954	WDR97	A6NE52	1622 aa		28.16	■■■□□ 2.1
CLASP2-223	ENST00000496954	AQR	O60306	1485 aa	Known RBP eCLIP	28.15	■■■□□ 2.1
CLASP2-223	ENST00000496954	TOP2B	Q02880	1626 aa		28.14	■■■□□ 2.1
CLASP2-223	ENST00000496954	BIVM-ERCC5	R4GMW8	1640 aa		28.12	■■■□□ 2.09
CLASP2-223	ENST00000496954	TDRD9	Q8NDG6	1382 aa	Known RBP	28.1	■■■□□ 2.09
CLASP2-223	ENST00000496954	SYNJ1	O43426	1573 aa		28.07	■■■□□ 2.08
CLASP2-223	ENST00000496954	ABCA10	Q8WWZ4	1543 aa		28.07	■■■□□ 2.08
CLASP2-223	ENST00000496954	OSCAR	Q8IYS5	282 aa		28.05	■■■□□ 2.08
CLASP2-223	ENST00000496954	GRIN2B	Q13224	1484 aa		27.97	■■■□□ 2.07
CLASP2-223	ENST00000496954	GAPVD1	Q14C86	1478 aa		27.95	■■■□□ 2.07
CLASP2-223	ENST00000496954	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.9	■■■□□ 2.06
CLASP2-223	ENST00000496954	ABCA5	Q8WWZ7	1642 aa		27.89	■■■□□ 2.06
CLASP2-223	ENST00000496954	SNAPC4	Q5SXM2	1469 aa		27.88	■■■□□ 2.05
CLASP2-223	ENST00000496954	FBLN2	P98095	1184 aa		27.83	■■■□□ 2.05
CLASP2-223	ENST00000496954	PBRM1	Q86U86	1689 aa		27.81	■■■□□ 2.04
CLASP2-223	ENST00000496954	CHMP7	Q8WUX9	453 aa	Predicted RBP	27.8	■■■□□ 2.04
CLASP2-223	ENST00000496954	CHD1	O14646	1710 aa		27.78	■■■□□ 2.04
CLASP2-223	ENST00000496954	SYNJ2	O15056	1496 aa		27.78	■■■□□ 2.04
CLASP2-223	ENST00000496954	ERICH3	Q5RHP9	1530 aa		27.73	■■■□□ 2.03
CLASP2-223	ENST00000496954	FHAD1	B1AJZ9	1412 aa		27.66	■■■□□ 2.02
CLASP2-223	ENST00000496954	KIF27	Q86VH2	1401 aa		27.66	■■■□□ 2.02
CLASP2-223	ENST00000496954	ADAMTS12	P58397	1594 aa		27.63	■■■□□ 2.01
CLASP2-223	ENST00000496954	GRIN2A	Q12879	1464 aa		27.58	■■■□□ 2.01
CLASP2-223	ENST00000496954	IGF1R	P08069	1367 aa		27.56	■■■□□ 2
CLASP2-223	ENST00000496954	CLASP1	Q7Z460	1538 aa		27.56	■■■□□ 2
CLASP2-223	ENST00000496954	TRIM41	Q8WV44	630 aa		27.55	■■■□□ 2
CLASP2-223	ENST00000496954	ARHGEF11	O15085	1522 aa		27.51	■■□□□ 1.99
CLASP2-223	ENST00000496954	RIMBP3C	A6NJZ7	1639 aa		27.49	■■□□□ 1.99
CLASP2-223	ENST00000496954	RIMBP3B	A6NNM3	1639 aa		27.49	■■□□□ 1.99
CLASP2-223	ENST00000496954	RIMBP3	Q9UFD9	1639 aa		27.49	■■□□□ 1.99
CLASP2-223	ENST00000496954	NUP160	Q12769	1436 aa		27.49	■■□□□ 1.99
CLASP2-223	ENST00000496954	CUL7	Q14999	1698 aa		27.44	■■□□□ 1.98
CLASP2-223	ENST00000496954	CEP170	Q5SW79	1584 aa		27.4	■■□□□ 1.98
CLASP2-223	ENST00000496954	CARMIL1	Q5VZK9	1371 aa		27.39	■■□□□ 1.98
CLASP2-223	ENST00000496954	CYB5RL	Q6IPT4	315 aa		27.29	■■□□□ 1.96
CLASP2-223	ENST00000496954	SENP3	Q9H4L4	574 aa	Predicted RBP	27.29	■■□□□ 1.96
CLASP2-223	ENST00000496954	RUSC2	Q8N2Y8	1516 aa		27.29	■■□□□ 1.96

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