RNA–Protein interactions for RNA: ENST00000496775.5

NOP56-218, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-218ENST00000496775 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
NOP56-218ENST00000496775 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
NOP56-218ENST00000496775 ABCC9O60706 1549 aa26.11■■□□□ 1.77
NOP56-218ENST00000496775 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
NOP56-218ENST00000496775 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
NOP56-218ENST00000496775 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
NOP56-218ENST00000496775 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
NOP56-218ENST00000496775 NACADO15069 1562 aa25.54■■□□□ 1.68
NOP56-218ENST00000496775 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
NOP56-218ENST00000496775 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
NOP56-218ENST00000496775 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
NOP56-218ENST00000496775 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
NOP56-218ENST00000496775 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
NOP56-218ENST00000496775 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
NOP56-218ENST00000496775 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
NOP56-218ENST00000496775 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
NOP56-218ENST00000496775 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
NOP56-218ENST00000496775 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
NOP56-218ENST00000496775 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
NOP56-218ENST00000496775 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
NOP56-218ENST00000496775 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
NOP56-218ENST00000496775 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
NOP56-218ENST00000496775 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
NOP56-218ENST00000496775 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
NOP56-218ENST00000496775 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
NOP56-218ENST00000496775 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
NOP56-218ENST00000496775 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
NOP56-218ENST00000496775 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
NOP56-218ENST00000496775 WIZO95785 1651 aa23.28■■□□□ 1.32
NOP56-218ENST00000496775 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
NOP56-218ENST00000496775 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
NOP56-218ENST00000496775 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
NOP56-218ENST00000496775 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
NOP56-218ENST00000496775 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
NOP56-218ENST00000496775 CFTRP13569 1480 aa22.81■■□□□ 1.24
NOP56-218ENST00000496775 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
NOP56-218ENST00000496775 NESP48681 1621 aa22.63■■□□□ 1.21
NOP56-218ENST00000496775 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
NOP56-218ENST00000496775 FANCD2Q9BXW9 1451 aa22.57■■□□□ 1.2
NOP56-218ENST00000496775 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
NOP56-218ENST00000496775 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
NOP56-218ENST00000496775 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
NOP56-218ENST00000496775 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
NOP56-218ENST00000496775 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
NOP56-218ENST00000496775 CUX2O14529 1486 aa22.29■■□□□ 1.16
NOP56-218ENST00000496775 WDR62O43379 1518 aa22.27■■□□□ 1.16
NOP56-218ENST00000496775 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
NOP56-218ENST00000496775 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
NOP56-218ENST00000496775 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
NOP56-218ENST00000496775 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
NOP56-218ENST00000496775 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
NOP56-218ENST00000496775 CUX1P39880 1505 aa22.11■■□□□ 1.13
NOP56-218ENST00000496775 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
NOP56-218ENST00000496775 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
NOP56-218ENST00000496775 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
NOP56-218ENST00000496775 SOGA1O94964 1423 aa22.06■■□□□ 1.12
NOP56-218ENST00000496775 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
NOP56-218ENST00000496775 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
NOP56-218ENST00000496775 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
NOP56-218ENST00000496775 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
NOP56-218ENST00000496775 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
NOP56-218ENST00000496775 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
NOP56-218ENST00000496775 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
NOP56-218ENST00000496775 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
NOP56-218ENST00000496775 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
NOP56-218ENST00000496775 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
NOP56-218ENST00000496775 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
NOP56-218ENST00000496775 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
NOP56-218ENST00000496775 EEA1Q15075 1411 aa21.77■■□□□ 1.08
NOP56-218ENST00000496775 GRIN2BQ13224 1484 aa21.77■■□□□ 1.07
NOP56-218ENST00000496775 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
NOP56-218ENST00000496775 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.079e-13■■■■□ 21.2
NOP56-218ENST00000496775 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
NOP56-218ENST00000496775 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
NOP56-218ENST00000496775 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
NOP56-218ENST00000496775 ABCA5Q8WWZ7 1642 aa21.67■■□□□ 1.06
NOP56-218ENST00000496775 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
NOP56-218ENST00000496775 IGF1RP08069 1367 aa21.63■■□□□ 1.05
NOP56-218ENST00000496775 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
NOP56-218ENST00000496775 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
NOP56-218ENST00000496775 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
NOP56-218ENST00000496775 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
NOP56-218ENST00000496775 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
NOP56-218ENST00000496775 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
NOP56-218ENST00000496775 FBLN2P98095 1184 aa21.53■■□□□ 1.04
NOP56-218ENST00000496775 CUL7Q14999 1698 aa21.53■■□□□ 1.04
NOP56-218ENST00000496775 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
NOP56-218ENST00000496775 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
NOP56-218ENST00000496775 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
NOP56-218ENST00000496775 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
NOP56-218ENST00000496775 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
NOP56-218ENST00000496775 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
NOP56-218ENST00000496775 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
NOP56-218ENST00000496775 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
NOP56-218ENST00000496775 NUP160Q12769 1436 aa21.32■■□□□ 1
NOP56-218ENST00000496775 KIF21BO75037 1637 aa21.29■■□□□ 1
NOP56-218ENST00000496775 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
NOP56-218ENST00000496775 GOLGA3Q08378 1498 aa21.27■■□□□ 1
NOP56-218ENST00000496775 CHD1O14646 1710 aa21.26■□□□□ 0.99
NOP56-218ENST00000496775 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms